Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J04
(853 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 39 0.004
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 36 0.032
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 36 0.055
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 35 0.073
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.096
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 34 0.13
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36) 33 0.29
SB_16120| Best HMM Match : efhand (HMM E-Value=0.0059) 32 0.51
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 31 1.6
SB_57086| Best HMM Match : PT (HMM E-Value=2.4) 31 1.6
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 31 1.6
SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 30 2.1
SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22) 30 2.7
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2) 29 4.8
SB_40011| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 29 6.3
SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1) 28 8.4
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 386 RHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQ 279
RHR H H H H QH H H H H H H HQ
Sbjct: 254 RHRYHHHHH-HHHQHNHHQHHHHHHHHHHNHHHHHQ 288
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H H H H H H H H H H H+ H +
Sbjct: 258 HHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQQHHHH 293
Score = 31.9 bits (69), Expect = 0.68
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHV 297
H+ H H H H H H H H H H+
Sbjct: 270 HQHHHHHHHHHHNHHHHHQQHHHHHHHHI 298
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQYLVL 267
H H H H H+ H H H H H H H + ++
Sbjct: 262 HHHHQHNH-HQHHHHHHHHHHNHHHHHQQHHHHHHHHII 299
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQYLVLV 264
H+ + H H H H H H H+ H H H H ++V
Sbjct: 265 HQHNHHQHHHHHHHHHHNHHHHHQQHHH-HHHHHIINIIV 303
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 39.1 bits (87), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 386 RHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
+H H H H H+ H H H H H H H + H +
Sbjct: 212 QHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHHYHHHH 248
Score = 37.5 bits (83), Expect = 0.014
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -3
Query: 389 QRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
+RH H H H H HQH H H H H H H Y
Sbjct: 208 RRHHQH-HQHHHHHHHQHNHHHHHHNHHHHHHHHYHHY 244
Score = 31.9 bits (69), Expect = 0.68
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQH 282
H H H H H H H H H H+H H H
Sbjct: 219 HHHHQHNH-HHHHHNHHHHHHHHYHHYHHHHHHH 251
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
+R H H H H H H H H H H H Y
Sbjct: 207 YRRHHQHHQHHHHHHH-QHNHHHHHHNHHHHHHHHY 241
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -3
Query: 386 RHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQYLV 270
+H H H H H H H H H H H H + ++
Sbjct: 223 QHNHHHHHHNHHHHHHH----HYHHYHHHHHHHNNNTII 257
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 36.3 bits (80), Expect = 0.032
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -3
Query: 392 VQRHRLHFHGHVHE------FQHQHLVPVHRHRLHFHVHEFQHQY 276
+ RHR H H H H +H+H +RHR H H H +H +
Sbjct: 166 IHRHRHHHHHHHHPSTIIIILRHRHRQHYNRHRRHHHHHRHRHHH 210
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 386 RHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQ 279
RHR H H H H H H P H + H+ H Q Q
Sbjct: 196 RHRRHHHHHRHRHHHHH--PNHPYSHHYPNHHRQQQ 229
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -3
Query: 392 VQRHRLHFHGHVHEFQHQHLVPVHRHRLHFH--VHEFQHQY 276
+ RHR H + H H H HRHR H H H + H Y
Sbjct: 185 ILRHRHRQHYNRHRRHHHH----HRHRHHHHHPNHPYSHHY 221
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 359 VHEFQHQ-HLVPVHRHRLHFHVHEFQHQYLVLVQRHR 252
VH H + +HRHR H H H ++++ RHR
Sbjct: 154 VHHHHHPLSIAIIHRHRHHHH-HHHHPSTIIIILRHR 189
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPV--HRHRLHFHVHEFQHQYLVLVQRHR 252
HR H H H H ++ + HRHR H++ H H + RHR
Sbjct: 167 HR-HRHHHHHHHHPSTIIIILRHRHRQHYNRHRRHHHH----HRHR 207
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 35.5 bits (78), Expect = 0.055
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 386 RHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
RHR H H H HQH H H H H H+ H +
Sbjct: 42 RHRYHHHHHHQHNHHQH----HHHHNHHHHHQQHHHH 74
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQYLVLV 264
H H H H H H H H H+ H H H +V++
Sbjct: 46 HHHHHHQHNHHQHHHHHNHHHHHQQHHHHHHHIINIIVII 85
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 35.1 bits (77), Expect = 0.073
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHR---LHFHVHEFQHQYLVLVQRHR 252
P + H H H H H H H HRHR H H H H+Y +RHR
Sbjct: 306 PYRYHHHHHHRHHHHHHHHHH-QRHRHRHRHRHRHHHHHHHEY---NRRHR 352
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 34.7 bits (76), Expect = 0.096
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 395 PVQRHRLHFHGHV-HEFQHQHLVPVHRHRLHFHV----HEFQHQYL-VLVQRHRL 249
P HR H H + H + HQH +HR+ H V H+ H+ L V++ H+L
Sbjct: 407 PQVTHRYHQHPQLTHRYHHQHPQVIHRYHQHPQVTHRYHQQTHKLLIVIINTHKL 461
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 34.3 bits (75), Expect = 0.13
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 362 HVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H H + H HL+ H H H H H +H +
Sbjct: 154 HHHHYYHHHLLHHHHHHWHHHHHHHRHHH 182
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 389 QRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQYLVL 267
+ H+ H H H H +QH H H+ H H H+ H VL
Sbjct: 944 ESHKRHRHSHHHHYQHYQYNHHHDHQSHQH-HDSHHHREVL 983
>SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36)
Length = 330
Score = 33.1 bits (72), Expect = 0.29
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 374 HFHGHVHEFQHQHLVPVHRHRLHFHV 297
H+H H H HQH H H+ H+H+
Sbjct: 269 HYHDHQHRNPHQHHNNHHDHQHHYHI 294
>SB_16120| Best HMM Match : efhand (HMM E-Value=0.0059)
Length = 399
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 383 HRLHFHGHVHEFQH--QHLVPVHRHRLHFHVH 294
H LH H H H+ H ++ HRH H+H +
Sbjct: 244 HHLHHHYHHHKHHHPVDGIITGHRHTYHYHYY 275
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 389 QRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQ 279
Q+H+LH +H+ Q QH H H H+ Q Q
Sbjct: 286 QQHQLHQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQ 322
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -3
Query: 374 HFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H H H H H H H H+ H H H H +
Sbjct: 7 HHHDHHHHDHHHHDHQHHDHQHHDHQHHDHHHH 39
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQYLVLV 264
H H H H H HQH H H H H ++ ++
Sbjct: 9 HDHHHHDH-HHHDHQHHDHQHHDHQHHDHHHHDHHHMTII 47
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVH 294
+ + H H H H H H+H H H H H H
Sbjct: 562 IAISTHPHHHHLHHHRHHHRHHHYHHHHYPHHHHH 596
>SB_57086| Best HMM Match : PT (HMM E-Value=2.4)
Length = 226
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
P Q + H + H++ HQ+ H + H++ HQY
Sbjct: 31 PHQYPHQYTHQYTHQYPHQYTHQYTHQYTHQYTHQYTHQY 70
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
P Q + H + H++ HQ+ H + H++ HQY
Sbjct: 116 PHQYPHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQY 155
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
P Q + H + H++ HQ+ H + H++ HQY
Sbjct: 120 PHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQY 159
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
P Q + H + H++ HQ+ H + H++ HQY
Sbjct: 35 PHQYTHQYTHQYPHQYTHQYTHQYTHQYTHQYTHQYTHQY 74
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
P Q + H + H++ HQ+ H + H++ HQY
Sbjct: 112 PHQYPHQYPHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQY 151
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQYLVLVQRHR 252
P Q + H + H++ HQ+ H + H + HQY H+
Sbjct: 47 PHQYTHQYTHQYTHQYTHQYTHQYTHQYTHPYTHPYTHQYTHQYTHHQ 94
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H + H + H++ HQ+ H + H++ HQY
Sbjct: 92 HHQYTHQYTHQYPHQYPHQYPHQYPHQYPHQYTHQY 127
Score = 29.5 bits (63), Expect = 3.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 368 HGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H + H++ HQ+ H + H++ HQY
Sbjct: 133 HQYTHQYTHQYTHQYTHQYTHQYTHQYTHQY 163
Score = 29.5 bits (63), Expect = 3.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 368 HGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H + H++ H + P H + H++ HQY
Sbjct: 169 HPYTHQYTHPYTHPYTHPYTHQYTHQYPHQY 199
Score = 29.5 bits (63), Expect = 3.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 368 HGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H + H++ HQ+ H + H++ HQY
Sbjct: 189 HQYTHQYPHQYTHQCTHQYTHQYTHQYTHQY 219
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
P Q + H + H++ HQ+ H + H++ HQY
Sbjct: 19 PHQYTHQYTHQYPHQYPHQYTHQYTHQYPHQYTHQYTHQY 58
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H+ H + H++ HQ+ H + H++ HQY
Sbjct: 88 HQYTHHQYTHQYTHQYPHQYPHQYPHQYPHQYPHQY 123
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
P Q + H + H++ HQ+ H + H++ HQY
Sbjct: 104 PHQYPHQYPHQYPHQYPHQYTHQYTHQYTHQYTHQYTHQY 143
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 395 PVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
P Q + H + H++ HQ+ H + H++ HQY
Sbjct: 108 PHQYPHQYPHQYPHQYTHQYTHQYTHQYTHQYTHQYTHQY 147
Score = 28.7 bits (61), Expect = 6.3
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -3
Query: 368 HGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H + H + HQ+ H + H++ HQY
Sbjct: 4 HQYTHHYTHQYTHQYPHQYTHQYTHQYPHQY 34
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 368 HGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H H + HQ+ P H + H++ HQY
Sbjct: 165 HQCTHPYTHQYTHPYTHPYTHPYTHQYTHQY 195
Score = 28.3 bits (60), Expect = 8.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 368 HGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H + H++ HQ+ H + H++ HQY
Sbjct: 185 HPYTHQYTHQYPHQYTHQCTHQYTHQYTHQY 215
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -3
Query: 374 HFHGHVHEFQ-HQHLVPVHRHRLHFHVHE 291
H HGH HE H H H H H H HE
Sbjct: 311 HSHGHSHENHGHSHENHGHSHENHGHSHE 339
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H H H H H H H H H H H H H++
Sbjct: 338 HENHGHSHKHH-GHSHDNHGHSHENHGHSHGHSHEH 372
>SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5)
Length = 260
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 14/56 (25%)
Frame = -3
Query: 389 QRHRLHFHGHVHEF----------QHQHLVPVHRHRLHFHVHEF----QHQYLVLV 264
QRHR H H H ++ QH H HRH H H ++ QH Y +++
Sbjct: 64 QRHRHHQHHHQLQYSVYSVSSASLQHHHQRQRHRHHQHHHQLQYIQCHQHHYSIII 119
>SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22)
Length = 237
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 344 HQHLVPVHRHRLHFHVHEFQHQYLVLVQRH 255
H H H H LH H H + H +L++ H
Sbjct: 170 HHHYY--HHHLLHHHHHHWHHHHLIIRHHH 197
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 362 HVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
H H + H HL+ H H H H +H +
Sbjct: 169 HHHHYYHHHLLHHHHHHWHHHHLIIRHHH 197
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 386 RHRLHFHGHVHEFQHQHLVPVHRHRLH-FHVHE 291
R+ H H H+H+ H H P H LH H HE
Sbjct: 396 RYSTHTHTHLHD-THTHETPRHDTHLHDTHPHE 427
>SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2)
Length = 238
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -3
Query: 374 HFHGHVHEFQHQHLVPVHRHRLHFHV---HEFQHQYLVLV 264
H + + H++QH H H H H H+ H + H +++
Sbjct: 90 HSYNYHHKWQHYH----HHHHYHHHLDYDHHYHHDLFIII 125
>SB_40011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFH 300
H+LH H H+H+ H H H LH H
Sbjct: 108 HQLHDHHHLHDHHHLH----GHHHLHDH 131
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -3
Query: 374 HFHGHV---HEFQHQHLVPVHRHRLHFHVHEFQHQYLVLVQR 258
H+H H H + HQ H H H H + + +++ +++ R
Sbjct: 1031 HYHHHRRRHHHYHHQQQHQFHHHHHHTH-YNYHYRHFLIIDR 1071
>SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1)
Length = 175
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 350 FQHQHLVPVHRHRLHFHVHEFQH-QYLVLVQRHRL 249
+ H H + H HFH+H H Q + RHRL
Sbjct: 94 YYHFHHYHYNHHHHHFHLHHHLHYQNYIHPYRHRL 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,142,694
Number of Sequences: 59808
Number of extensions: 106029
Number of successful extensions: 724
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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