Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J04
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.72 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   2.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   2.9  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.9  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   2.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           +P Q+    +H   H    QH    H H  H H H  Q Q+
Sbjct: 163 LPQQQQPSSYHQQQHPGHSQH----HHHHHHHHPHHSQQQH 199


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 362 HVHEFQHQHLVPVHRHRLH 306
           H H+  H H +P H H  H
Sbjct: 93  HHHQHPHHHQLPHHPHHQH 111


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 362 HVHEFQHQHLVPVHRHRLH 306
           H H+  H H +P H H  H
Sbjct: 93  HHHQHPHHHQLPHHPHHQH 111


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 362 HVHEFQHQHLVPVHRHRLHFHVHEFQHQYL 273
           H H  QH HL  V +H  H  VH   H  L
Sbjct: 119 HQHHHQHPHLPHVQQH--HPSVHHPAHHPL 146



 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 311 LHFHVHEFQHQYLVLVQRH 255
           L+ H H  QH +L  VQ+H
Sbjct: 116 LNHHQHHHQHPHLPHVQQH 134


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 389 QRHRLHFHGHVHEFQHQHLVPVHRHRLH 306
           Q+ +   H H H+ Q QH    H H  H
Sbjct: 305 QQQQQQHHHHQHQPQQQHQQQYHSHPHH 332


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -3

Query: 386 RHRLHFHGHVHEFQHQHLVPVHRHRLHFH 300
           R+ +  H   H+ Q Q    +H H  H H
Sbjct: 139 RNGIVLHHQAHQQQQQQQQQLHHHHHHHH 167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,169
Number of Sequences: 2352
Number of extensions: 4553
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)