Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_J04
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23523-5|AAC46556.1|   77|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr...    31   1.4  
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.       31   1.4  
U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U70845-2|AAB09100.1|  102|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>U23523-5|AAC46556.1|   77|Caenorhabditis elegans Hypothetical
           protein F53A9.1 protein.
          Length = 77

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEF 288
           H  H HG +HE  H      H H  H H H +
Sbjct: 46  HHHHHHGFLHELGHAMTGHHHHHHGHHHGHHY 77


>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
          Length = 1815

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 398 VPVQRHRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           VPV  H+LH +   H+++  HL P HR R   H  E    Y
Sbjct: 200 VPVNHHQLHPNSSAHQYE-SHLHP-HRTRQLLHTREGAASY 238


>U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical
           protein F53A9.2 protein.
          Length = 83

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 383 HRLHFHGHVHEFQHQ--HLVPVHRHRLHFHVHEFQHQY 276
           H  H H H H F H+  H +  H H  H H H F H +
Sbjct: 42  HHGHHHHH-HSFLHELGHALTGHHH--HHHGHHFGHHH 76


>Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical
           protein H13N06.5 protein.
          Length = 462

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -3

Query: 374 HFHGHVHEFQHQHLVP-VHRHRLHFHVHEFQHQY 276
           H HGH H+  H H     H H  H H H+ +  +
Sbjct: 76  HDHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDH 109



 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
 Frame = -3

Query: 374 HFHGHVHEFQHQHLVPVHRH---RLHFHVHEFQH 282
           H HGH H+  H H    H H     H H H   H
Sbjct: 84  HDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDH 117


>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
            F29G6.3c protein.
          Length = 1453

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -3

Query: 359  VHEFQHQHLVPVHRHRLHFHVHEF--QHQYLVLVQRHR 252
            VH+ Q  H VP+       H  +   QHQY+ L  RH+
Sbjct: 984  VHKGQEHHYVPLIAKPTESHASKIVIQHQYIPLAMRHQ 1021


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
            F29G6.3b protein.
          Length = 1785

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -3

Query: 359  VHEFQHQHLVPVHRHRLHFHVHEF--QHQYLVLVQRHR 252
            VH+ Q  H VP+       H  +   QHQY+ L  RH+
Sbjct: 984  VHKGQEHHYVPLIAKPTESHASKIVIQHQYIPLAMRHQ 1021


>U70845-2|AAB09100.1|  102|Caenorhabditis elegans Hypothetical
           protein F22H10.2 protein.
          Length = 102

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 383 HRLHFHGHVHEFQHQHLVPVHRHRLHFHVHEFQHQY 276
           H  H HG +H   H  L   H H  H   H F H +
Sbjct: 62  HHHHHHGLLHGLGHA-LTGGHHHHHHHGGHHFGHHH 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,026,718
Number of Sequences: 27780
Number of extensions: 74197
Number of successful extensions: 388
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)