Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_J03
(825 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.053
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 33 0.28
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 33 0.28
SB_59462| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_36576| Best HMM Match : FerB (HMM E-Value=9) 32 0.49
SB_7910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 31 0.86
SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 31 0.86
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17) 30 2.0
SB_32532| Best HMM Match : RHS_repeat (HMM E-Value=3.2e-06) 30 2.6
SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058) 30 2.6
SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0) 29 4.6
SB_12928| Best HMM Match : Sulfotransfer_1 (HMM E-Value=9.3e-10) 29 4.6
SB_54949| Best HMM Match : Protamine_P1 (HMM E-Value=1.5) 29 6.1
SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 29 6.1
SB_48195| Best HMM Match : DUF229 (HMM E-Value=0) 28 8.0
SB_19358| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 35.5 bits (78), Expect = 0.053
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Frame = -2
Query: 326 YLRFGSSC-TSSIFEG---RIG-WSA-----VLGARGTLSP*YSHSGSWPACRAVRVIGR 177
++ FG SC I G +G W + ++ G +S H GSW +CR + ++
Sbjct: 78 HVEFGGSCRVLGIMSGCGNHVGSWESCRVVGIMSGCGIMSSPGDHVGSWGSCRVLGIMSG 137
Query: 176 CVGGGLKVG 150
C GGGL++G
Sbjct: 138 C-GGGLRIG 145
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 238 DNVPRAPSTADHPI--LPSKIDDV--QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGL 402
+ + RA ADH I + K+D QLD N +Y++ + NP+ + ++ V
Sbjct: 253 EEIERAKVAADHLISEVKDKLDIAKEQLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTA 312
Query: 403 DQPIESHR 426
+ +ESHR
Sbjct: 313 ENLVESHR 320
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 238 DNVPRAPSTADHPI--LPSKIDDV--QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGL 402
+ + RA ADH I + K+D QLD N +Y++ + NP+ + ++ V
Sbjct: 229 EEIERAKVAADHLISEVKDKLDIAKEQLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTA 288
Query: 403 DQPIESHR 426
+ +ESHR
Sbjct: 289 ENLVESHR 296
>SB_59462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 532 RRHASDDQEELRQYNEHFLISEGYFPKNRESSRNKRFRSALLYSLNRNYSSXXDILNSS- 708
+R + ++EE R + EHF FP+ +R+KR + LL +N+ + SS
Sbjct: 79 KRRKNPNEEESRVFQEHF------FPEPSHCTRDKRIQVNLLEGSEKNFLELANTFLSSR 132
Query: 709 -CIKIXCILKWPV 744
+ LKWPV
Sbjct: 133 PVDAMKSRLKWPV 145
>SB_36576| Best HMM Match : FerB (HMM E-Value=9)
Length = 223
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -1
Query: 309 ELHVVDFRRKNRMVCSTWRTRNIVTLIQP*RFLASLSRCTCYRALCWRWPEGRLDEPLAR 130
ELH+ FRR+NRM R+I++ F CT Y+ +CW++ E R+ L
Sbjct: 64 ELHM--FRRENRMAGKQLPARDILS------FENKRRNCTVYKCVCWQYSE-RMHSSLIE 114
Query: 129 SLSKEQHQ 106
+S Q
Sbjct: 115 LVSSYLRQ 122
>SB_7910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 496 PKPIYIDMGNRYRRHASDDQ--EELRQYNEHFLISEGYFPKNRESSRNKRFRSALL 657
P P Y+D+ N RH++DD + LRQ E FP + S R ++ S++L
Sbjct: 63 PFPEYVDIANTDFRHSTDDVKIKILRQSPESASWRAFEFPSKQISGRQRKMTSSML 118
>SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
Length = 147
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 240 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 353
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 6 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 240 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 353
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 62 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99
>SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
Length = 147
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 240 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 353
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 6 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 240 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 353
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 62 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 240 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 338
QCS+C+K S S + R + KP +CS C
Sbjct: 762 QCSTCSKSYSTSRSLVRHERSHSSEKPYLCSDC 794
>SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17)
Length = 473
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 343 NPENNEASIEHSHHTVDTGLDQPIESHRNTRDLRFLYPRGKLPVPTLPPFNPKPIYIDMG 522
+PEN++ + H V + L P + +TR +P LP P+LP P I D
Sbjct: 24 SPENSDTLYHYCRHLVPS-LPTPGTTTADTRHHHCRHPAPSLPAPSLPA--PGTITADTW 80
Query: 523 NRYRRH 540
+ RH
Sbjct: 81 YHHCRH 86
>SB_32532| Best HMM Match : RHS_repeat (HMM E-Value=3.2e-06)
Length = 618
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G P NP+P Y GN R+ + R Y L S Y+P SR
Sbjct: 351 YPSGNPQSRYYPSGNPQPRYYPSGNPQSRYYPSGNPQSRYYPSGNLQSR-YYPSGNLQSR 409
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+P Y GN R+ + R Y S Y+P SR
Sbjct: 51 YPSGNLQSRYYPSGNPQPRYYPSGNPQSRYYPSGNPQPRYYPSGNPQSR-YYPSGNLQSR 109
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP Y GN R+ + R Y L S Y+P SR
Sbjct: 161 YPSGNLQSRYYPSGNPHSRYYPFGNLQSRYYPSGNLQSRYYPSGNLQSR-YYPSGNPQSR 219
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+P Y GN + R Y L S Y+P SR
Sbjct: 531 YPSGNLQSRYYPSGNPQPRYYPSGNHSPGITPSGNPQPRYYPSGNLQSR-YYPSGNTQSR 589
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+ Y GN R+ + R Y L S Y+P SR
Sbjct: 101 YPSGNLQSRYYPSGNPQSRYYPSGNLQSRYYPSGNLQSRYYPSGNLQSR-YYPSGNLQSR 159
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+ Y GN R+ + R Y L S Y+P SR
Sbjct: 411 YPSGNLQSRYYPSGNPQSRYYPSGNLQSRYYPSGNLQPRYYPSGNLQSR-YYPSGNLQSR 469
>SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)
Length = 820
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G P NP+P Y GN R+ + R Y L S Y+P SR
Sbjct: 118 YPSGNPQPRYYPSENPQPRYYPSGNLQSRYYPSGNPQSRYYPSGNLQSR-YYPSGNLQSR 176
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+P Y GN R+ + + R Y S Y+P + +++
Sbjct: 378 YPSGNLQSRYYPSGNPQPRYYPSGNPQPRYYTSGNPQPRYYLSGNPQSR-YYPSWKSTAQ 436
Query: 631 NKRFRS 648
+ + S
Sbjct: 437 PRYYHS 442
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+P Y GN R+ + R Y S Y+P SR
Sbjct: 198 YPSGNLQSRYYPSGNPQPRYYPSGNPQSRYYPSGNLQSRYYPSGNPQSR-YYPSGNLQSR 256
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+ Y GN R+ + R Y L S Y+P SR
Sbjct: 138 YPSGNLQSRYYPSGNPQSRYYPSGNLQSRYYPSGNLQSRYYPSGNLQSR-YYPSGNLQSR 196
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+ Y GN R+ + R Y L S Y+P SR
Sbjct: 228 YPSGNLQSRYYPSGNPQSRYYPSGNLQSRYYPSGNLQSRYYPSGNLQSR-YYPSGNLQSR 286
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 451 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASDDQEELRQYNEHFLISEGYFPKNRESSR 630
YP G L P NP+ Y GN R+ + R Y L S Y+P SR
Sbjct: 318 YPSGNLQSRYYPSGNPQSRYYPSGNLQSRYYPSGNLQSRYYPSGNLQSR-YYPSGNLQSR 376
>SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0)
Length = 1227
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +2
Query: 200 DKLARNRYGCIKVTMFLVRQVLQTIRFFLRKSTT------CSSIQTEGMFAVSPIQKI 355
D ++R+R C+ V + ++ Q+ L + T C+S+ G+ AVS I KI
Sbjct: 890 DPVSRDRRSCLPVHLCILSQLYDAFSVLLDSTETAYLSVGCASVMCLGLCAVSAIMKI 947
>SB_12928| Best HMM Match : Sulfotransfer_1 (HMM E-Value=9.3e-10)
Length = 221
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +1
Query: 289 KIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDT--GLDQP--IESHRNTRDLRFLYP 456
KID+ Q+D +++ ++ P + A+ + + + T GL +P +++H N + +
Sbjct: 78 KIDETQIDKKVKFLDTMFIPAD-PANPKTPNDVIKTFQGLPRPRLLKTHLNYQYVPMGED 136
Query: 457 RGKLPVPTLPPFNPKPIYIDMGNRY 531
RG P + NPK ++ N Y
Sbjct: 137 RGSAPKTIVVMRNPKDAFVSYFNHY 161
>SB_54949| Best HMM Match : Protamine_P1 (HMM E-Value=1.5)
Length = 107
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 526 RYRRHASDDQEELRQYNEHFLISEGYFPKNR 618
RYRRH D + + +Y H + +EG ++R
Sbjct: 38 RYRRHDIDTEGRITRYRRHDIDTEGRITRHR 68
>SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 1413
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 287 RKSTTCSSIQTEGMFAVSPIQKITRRPLN--IH-IIQLILDLTSRSRATVTQGTCGFCTL 457
RK++T SS + A P Q + P + +H I+ L+L LTS + T++QG+ + +
Sbjct: 297 RKASTASSHSSSFRLAKKP-QHVCSNPPSCLLHSIVALLLCLTSDGQLTLSQGSANWSSA 355
Query: 458 EGNC 469
+C
Sbjct: 356 LQSC 359
>SB_48195| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 1743
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 428 TQGTCGFCTLEGNCLFQRFLRLTPSQ 505
T GTC F + G LF R LRL PSQ
Sbjct: 230 TSGTCVFLFIFG-ILFDRHLRLRPSQ 254
>SB_19358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 293 STTCSSIQTEGMFAVSPIQK 352
STTCS++ T G +A++P +K
Sbjct: 89 STTCSAVTTVGGYAITPFRK 108
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,709,557
Number of Sequences: 59808
Number of extensions: 550754
Number of successful extensions: 1873
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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