Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I22
         (974 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    40   0.073
UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1; ...    39   0.22 
UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    38   0.29 
UniRef50_Q5C7F5 Cluster: SJCHGC06841 protein; n=1; Schistosoma j...    34   4.8  

>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 40.3 bits (90), Expect = 0.073
 Identities = 28/87 (32%), Positives = 30/87 (34%)
 Frame = +2

Query: 707 PPPPPPXXXXFFXXXGGGGXPPXFXFFFFXXKKKKKXXXXXPAXGXXXPXHXXIXXXXXX 886
           PPPPPP         GGGG  P   FFFF    ++      P                  
Sbjct: 7   PPPPPPKKKKKKKGRGGGGAHPHL-FFFFLGGGREGGGGAPPPPPARRQKFFFFPHFFFP 65

Query: 887 XXXXRXXGGGXXTKKKXGGXXXPPXPP 967
               R  GG    KKK GG   PP PP
Sbjct: 66  PPPRRGGGGVFFYKKKRGG---PPPPP 89


>UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 272

 Score = 38.7 bits (86), Expect = 0.22
 Identities = 28/72 (38%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 915 PPPXXRGXGRKGKKXKXXWXXGXXXPXAGXXXXXFFFFXXKKKKKXKXGGXPPP--PXXK 742
           PPP  +    K KK K         P        FFF   KKKKK +    PPP  P  K
Sbjct: 204 PPPQKK----KKKKKKIFSFSLFPTPRKKKTYFYFFFLFLKKKKKQR----PPPSYPLKK 255

Query: 741 KKXXXXGGGGGG 706
           +K    GGGGGG
Sbjct: 256 EKNKRGGGGGGG 267


>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 38.3 bits (85), Expect = 0.29
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = +2

Query: 737 FFXXXGGGGXPPXFXFFFFXXKKKKK 814
           FF   GGGG  P F FFFF  KKKK+
Sbjct: 19  FFVGCGGGGGGPLFFFFFFSKKKKKR 44



 Score = 28.7 bits (61), Expect(2) = 4.6
 Identities = 26/73 (35%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
 Frame = +1

Query: 736 FFFXXGGGGXPPXFXFFF--FFXXKKKKXXXXPXGXGGXXPXXPXXFXFFSFSXXPPXXG 909
           FFF       PP F FFF  FF    KK      G GG  P  P     F     PP   
Sbjct: 94  FFFFPPPQQNPPPFFFFFLGFFLFFFKK-----RGGGGFSPPPPKKKKIF----FPPPKK 144

Query: 910 GXXXXKKKXXGXG 948
                KKK  G G
Sbjct: 145 KKKGQKKKRGGGG 157



 Score = 24.6 bits (51), Expect(2) = 4.6
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = +1

Query: 514 PPPXFXXXXXXXXXXQKKRXGXXXGGXXXFFFXPPP 621
           PPP             KKR G    G   FFF PPP
Sbjct: 69  PPPPLKKKKKIFFFFFKKRGG----GGGFFFFFPPP 100


>UniRef50_Q5C7F5 Cluster: SJCHGC06841 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06841 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 125

 Score = 34.3 bits (75), Expect = 4.8
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +3

Query: 837 GGXXPRXTXXFXFFFLFXXPPXRGGXGXXQKKKXGGGXXPPXPP 968
           GG  P+      FF        + G G  +KKK GGG  PP PP
Sbjct: 13  GGTHPQKYFFPLFFLAPGFLQTKEGGGGEKKKKGGGGGGPPPPP 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,939,883
Number of Sequences: 1657284
Number of extensions: 6549219
Number of successful extensions: 32264
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29282
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 91040045921
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)