Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I22
         (974 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683...    31   1.8  
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998...    30   2.4  
06_01_0941 + 7241050-7241331                                           29   4.2  
11_06_0652 - 25906001-25906237,25906345-25906830                       29   5.6  
08_02_1387 - 26648977-26649408                                         29   5.6  
02_02_0594 - 11967401-11967832                                         29   5.6  

>06_01_0893 -
           6834350-6834464,6835042-6835218,6835301-6835350,
           6836348-6836416,6836495-6836593,6836681-6836759,
           6837604-6837704,6838645-6838713,6839548-6839588,
           6839793-6841159,6841472-6841575,6841914-6842351,
           6843040-6843567
          Length = 1078

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -3

Query: 762 PPPPXXKKKXXXXGGGGGG 706
           PPPP  KK     GGGGGG
Sbjct: 23  PPPPVSKKGGGGGGGGGGG 41


>07_03_0965 -
           22996575-22999112,22999202-22999636,22999717-22999801,
           22999888-22999957,23000050-23000293,23000396-23000482,
           23000655-23000706,23000830-23001226,23001324-23001648,
           23001748-23001914,23002007-23002547
          Length = 1646

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 771 GGXPPPPXXKKKXXXXGGGGGG 706
           GG PPPP  + +    GGGG G
Sbjct: 19  GGGPPPPRRRLRSSGGGGGGSG 40


>06_01_0941 + 7241050-7241331
          Length = 93

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -3

Query: 771 GGXPPPPXXKKKXXXXGGGGGGXLXXXXKKK 679
           G  PPPP         GGGGGG      K K
Sbjct: 17  GSDPPPPSSSSGKRSGGGGGGGGKKGMEKTK 47


>11_06_0652 - 25906001-25906237,25906345-25906830
          Length = 240

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 794 KKKKXKKXGGXPPPPXXKKXXXXXGXGG 711
           K+++ KK  G PPPP   +     G GG
Sbjct: 195 KRRRGKKAAGPPPPPQQPQFRPRAGAGG 222



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 795 KKKKKXKXGGXPPPPXXKKKXXXXGGGGG 709
           K+++  K  G PPPP   +     G GGG
Sbjct: 195 KRRRGKKAAGPPPPPQQPQFRPRAGAGGG 223


>08_02_1387 - 26648977-26649408
          Length = 143

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 783 KXKXGGXPPPPXXKKKXXXXGGGGGG 706
           K + GG P PP         GGGGGG
Sbjct: 24  KHRNGGWPEPPEGSFAVYVGGGGGGG 49


>02_02_0594 - 11967401-11967832
          Length = 143

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 783 KXKXGGXPPPPXXKKKXXXXGGGGGG 706
           K + GG P PP         GGGGGG
Sbjct: 24  KHRNGGRPEPPEGSFAVYVGGGGGGG 49


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,931,358
Number of Sequences: 37544
Number of extensions: 342349
Number of successful extensions: 3489
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3186
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)