Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I22
         (974 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   6.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.9  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   7.9  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -3

Query: 795 KKKKKXKXGGXPPPPXXKKKXXXXGGGGGGXL 700
           KK +         P    +K    GGGGGG L
Sbjct: 280 KKTRHLSTSSADEPDACDRKAPGGGGGGGGKL 311


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 908 GGGXXTKKKXGGXXXPPXPPP 970
           G G   +   GG   PP PPP
Sbjct: 515 GAGYDGRDLTGGPLGPPPPPP 535


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 626 GGGGGXKKKXXXPPXXXPXL 567
           GGGG   KK   PP   P +
Sbjct: 245 GGGGSSSKKGGPPPHIYPWM 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,956
Number of Sequences: 2352
Number of extensions: 5354
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106474641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)