Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I20
(830 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 36 0.052
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 34 0.12
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 34 0.16
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 33 0.28
03_02_0023 + 5065962-5066079,5066179-5067614 33 0.28
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 31 1.1
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998... 30 2.6
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 30 2.6
10_06_0088 - 10538037-10539463,10539696-10539789 29 4.5
02_04_0281 + 21563588-21563696,21565053-21565708,21565793-215658... 29 4.5
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 29 6.0
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120... 28 7.9
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335... 28 7.9
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 35.5 bits (78), Expect = 0.052
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVA 634
L+LS ++ S SL +GA+ GA+ SG EY GRK + + W+ ++
Sbjct: 95 LKLSISEFSAFGSLSNVGAMVGAIASGQMAEYIGRKGSLIIAAVPNIIGWLAIS 148
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVA 634
L+L+ ++ S SL +GA+ GA+ SG EY GRK + + W+ ++
Sbjct: 94 LDLTLSEFSVFGSLSNVGAMVGAIASGQMAEYIGRKGSLMIAAIPNIIGWLAIS 147
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -1
Query: 563 RNQAQRVQRQTPLPNTRVTPPRILGYLTTPDEF*SFHHKSNSALPSPV 420
R++ ++R++PLP R+TPPR + + P S H+S S + P+
Sbjct: 334 RDRGSPIRRRSPLPRRRLTPPRRM--WSPPRRPQSLRHRSRSPIHRPI 379
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVA 634
L L+ ++ S SL +GA+ GA+ SG EY GRK + + W+ ++
Sbjct: 94 LGLTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLAIS 147
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +2
Query: 464 KTRLELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSP 643
K L+++DTQ +A ++ + ++FG++ +G ++ GR+ T +L+ +P
Sbjct: 52 KEDLKITDTQIEILAGVINIYSLFGSLAAGMTSDWLGRRYTMVLAAAIFFTGALLMGLAP 111
Query: 644 NVYGFI 661
N Y F+
Sbjct: 112 N-YAFL 116
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 479 LSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILV 631
LS+++ S+L +GA+ GA+ SG + GRK T V W +
Sbjct: 1022 LSNSEYGVFGSVLTIGAMIGALTSGRLADSLGRKTTMGLAAIIGIVGWFTI 1072
>03_03_0040 -
13999040-13999179,13999524-13999638,13999759-13999818,
14000007-14000060,14000274-14000333,14000418-14000480,
14000552-14000595,14000671-14000755,14000904-14001028,
14001368-14001432,14001460-14001518,14001678-14001743,
14001870-14001935,14002019-14002105,14002168-14002257,
14002378-14002440,14003153-14003419
Length = 502
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 479 LSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRK 580
LS +Q + S+L +GA+ GAV SG ++ GRK
Sbjct: 106 LSISQFALFGSVLTIGAMIGAVTSGRLADFLGRK 139
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 470 RLELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNV 649
+LE T + ++ +GA SGP ++ GR+ +S +++ SPNV
Sbjct: 66 KLESEPTVEGLIVAMSLIGATIITTFSGPVSDWIGRRPMLILSSILYFLSSLIMLWSPNV 125
Query: 650 Y 652
Y
Sbjct: 126 Y 126
>10_06_0088 - 10538037-10539463,10539696-10539789
Length = 506
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 464 KTRLELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSP 643
K L+ +DTQ +A +L + A+ G++ +G + GR+ T V +L+ +P
Sbjct: 44 KEDLKTNDTQVQVLAGILNVCALVGSLTAGRVSDCVGRRLTISLAACIFLVGSVLMGLAP 103
Query: 644 N 646
N
Sbjct: 104 N 104
>02_04_0281 +
21563588-21563696,21565053-21565708,21565793-21565879,
21566487-21567461,21567640-21567786
Length = 657
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 207 TAGQSKWPPQSPRPHGDNSGYQKGYIRNHHAICGHR 314
T + W SPRP DN G + G RNH + HR
Sbjct: 21 TGAANLWTVASPRPGPDNQG-RGGSSRNHSSSGHHR 55
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRK 580
L+LS ++ S S++ +GA+ GAV SG + GRK
Sbjct: 56 LQLSLSEYSVFGSIITIGAMIGAVASGHLADISGRK 91
>12_02_0012 -
12309332-12310228,12311087-12311669,12311945-12312051,
12313190-12313237,12315139-12315216,12315300-12315500,
12315612-12315797,12315870-12316007,12318311-12318416,
12318529-12318587
Length = 800
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 597 KYSXVFFLPKYSXSGPEGTAPNTAPKHKSDATQDPW 490
KY +++ SG G APNTA H + A PW
Sbjct: 671 KYEGTYYM---ITSGCTGWAPNTALAHAATAIMGPW 703
>11_06_0421 +
23331702-23331723,23332161-23332197,23333397-23333533,
23333675-23334241,23335068-23335777,23335915-23336102,
23336489-23336918
Length = 696
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Frame = +2
Query: 359 WSSSALPLLITEYGKDYTTPIPDWAEQNSTYDENFKTRLELSDTQGSWVASLLCLGAVFG 538
+S+ A+ + T G D+TT + N + + N + E G + ++ +VFG
Sbjct: 40 FSAVAVSIGYTLLGWDFTTVLG-----NPSAEANIHMKKEFGLNNGPSIDGIILAVSVFG 94
Query: 539 AVP----SGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVY 652
++ SG ++ GR+ +L+ SPN+Y
Sbjct: 95 SIAITVFSGSLLDWLGRRAALIYSSLLLISGGLLMVWSPNIY 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,865,330
Number of Sequences: 37544
Number of extensions: 549748
Number of successful extensions: 1572
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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