Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I20
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48543-1|CAA88432.1|  645|Caenorhabditis elegans Hypothetical pr...    33   0.33 
U41023-1|AAA82340.1|  569|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AL132862-28|CAB60545.2|  610|Caenorhabditis elegans Hypothetical...    29   3.1  
U28737-3|AAA68273.1|   67|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z99270-1|CAB16470.4|  500|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical...    29   5.4  
Z81134-4|CAB03451.1|  322|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AC006769-14|AAF60579.1|  378|Caenorhabditis elegans Hypothetical...    28   7.1  
Z99281-4|CAB16509.1|  571|Caenorhabditis elegans Hypothetical pr...    28   9.4  
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>Z48543-1|CAA88432.1|  645|Caenorhabditis elegans Hypothetical
           protein C18D1.1 protein.
          Length = 645

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
 Frame = -3

Query: 522 KHKSDATQDPWVSDNSR---RVLKFSS*VEFCSAQSGIGVV*SFPYSVINNG------NA 370
           + +S  +  P VS NS     V   +S    CSA S    V S P +VI NG      N 
Sbjct: 141 QRESSPSPPPAVSLNSTLASMVFPTTSTATECSAASTTSSVDSAPSTVIVNGHSNSQSNT 200

Query: 369 DDDHATQTPAAK 334
           DDD  TQ P+AK
Sbjct: 201 DDDDVTQQPSAK 212


>U41023-1|AAA82340.1|  569|Caenorhabditis elegans Hypothetical
           protein F53H8.3 protein.
          Length = 569

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +2

Query: 419 IPDWAEQNSTYDENFKTRLELSDTQGSW--VASLLCLGAVFGAVPSGPDXEYFGRK 580
           I DW   N TY + +K  L L+ +   W  V S + +GA+ GA  +    E +GR+
Sbjct: 34  ITDWI--NQTYIDRYKAPLSLTVSNVIWSFVVSSIAIGAILGASFTRIIGEKYGRR 87


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +2

Query: 455 ENFKTRLELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVA 634
           ++FK          +W+A++  +GA+ GA+  G   ++FGRK           +  +   
Sbjct: 83  QDFKMFCGTKAYDSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASG 142

Query: 635 SSPNVYGF-ICRXICG 679
            +P+   F +   ICG
Sbjct: 143 FAPSWEVFAVLLFICG 158


>U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical
           protein F23F12.13 protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 455 ENFKTRLELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRK 580
           ++FK          +WVA++  +G + GA+  G   ++FGRK
Sbjct: 83  QDFKMFCGTKAYDAAWVATIQFIGVLIGAITYGHLGDHFGRK 124


>AL132862-28|CAB60545.2|  610|Caenorhabditis elegans Hypothetical
           protein Y73F8A.19 protein.
          Length = 610

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 11  LPPHYRESLRFDLSRATQSSCNG 79
           +PPHYR+S  F LS    ++C G
Sbjct: 364 IPPHYRDSNNFCLSLDADATCQG 386


>U28737-3|AAA68273.1|   67|Caenorhabditis elegans Hypothetical
           protein F14B8.2 protein.
          Length = 67

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 510 HSCVWERCLALYPLGLIXNTSVGKRXY 590
           H+C WER +AL  LGL+   ++G+  Y
Sbjct: 11  HACQWERDIALVFLGLMVLFNIGQVVY 37


>Z99270-1|CAB16470.4|  500|Caenorhabditis elegans Hypothetical
           protein Y37A1A.3 protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
 Frame = -3

Query: 567 YSXSGPEGT--APNTAPKHKSDATQDP----WVSDNSRRVLKFSS*VEFCSAQSGIGVV* 406
           +  S PE    A N    H+   +Q+     W S  +RR       V F  A SGI V+ 
Sbjct: 253 HGISDPEAEVFADNLIETHQITRSQESIISVWKSPFNRRGTLLGMMVTFSMAMSGITVIN 312

Query: 405 SFPYSVINNGNADDDHATQTPAA 337
           +F + ++ N     D A    AA
Sbjct: 313 AFAFEILMNVGMKQDTAAIANAA 335


>AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical
           protein Y51A2D.18 protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 509 SLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVYGF-ICRXICG 679
           S+   G + G++  G   + FGRK           + W++V  S N+  F I R I G
Sbjct: 133 SVQMFGVLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLIVVQSRNLLHFTISRTIVG 190


>Z81134-4|CAB03451.1|  322|Caenorhabditis elegans Hypothetical
           protein T28D6.7 protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 128 RLCFGTDKWKNKVHRLWKP 184
           + C G  +WK K H  WKP
Sbjct: 253 KACLGYPEWKEKHHPTWKP 271


>AC006769-14|AAF60579.1|  378|Caenorhabditis elegans Hypothetical
           protein Y45G12C.1 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 567 TSVGKRXYCTWLYHCSSLGF*SLRAQTSMGLY 662
           T VGKR  CTWL     L    L  Q+ + LY
Sbjct: 90  TLVGKRFNCTWLSTLEDLKLVGLHEQSLVDLY 121


>Z99281-4|CAB16509.1|  571|Caenorhabditis elegans Hypothetical
           protein Y57G11C.7 protein.
          Length = 571

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 413 TPIPDWAEQNSTYDENFKT-RLELSDTQGSWVASLLCL 523
           T + +W ++NS  ++ FKT ++ L++ +  +V  +L L
Sbjct: 476 TGVVEWMKKNSIMEKQFKTKKVRLAEVKSDYVIDILSL 513


>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
           protein C34E10.8 protein.
          Length = 1024

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 515 RVTPPRILGYLTTPDEF*SFHHKSNSALPSPVSV*YN 405
           R+ P R   + T+P+ +  FH +S   +PS +S  YN
Sbjct: 459 RLPPRRSPSFGTSPNSY-QFHQQSQKKMPSIISTAYN 494


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,879,319
Number of Sequences: 27780
Number of extensions: 449994
Number of successful extensions: 1431
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)