Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I20
(830 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g48020.2 68415.m06011 sugar transporter, putative similar to ... 36 0.002
At2g48020.1 68415.m06010 sugar transporter, putative similar to ... 36 0.002
At1g08930.1 68414.m00994 early-responsive to dehydration stress ... 39 0.004
At3g05150.1 68416.m00559 sugar transporter family protein simila... 38 0.011
At5g27360.1 68418.m03267 sugar-porter family protein 2 (SFP2) id... 36 0.025
At3g05155.1 68416.m00560 sugar transporter, putative similar to ... 34 0.10
At2g43330.1 68415.m05388 sugar transporter family protein simila... 33 0.18
At5g18840.1 68418.m02239 sugar transporter, putative similar to ... 33 0.23
At1g75220.1 68414.m08738 integral membrane protein, putative str... 33 0.23
At3g05165.2 68416.m00563 sugar transporter, putative similar to ... 33 0.31
At3g05165.1 68416.m00562 sugar transporter, putative similar to ... 33 0.31
At3g05160.1 68416.m00561 sugar transporter, putative similar to ... 33 0.31
At1g54730.2 68414.m06240 sugar transporter, putative similar to ... 32 0.41
At1g19450.1 68414.m02423 integral membrane protein, putative / s... 32 0.41
At1g08920.2 68414.m00993 sugar transporter, putative similar to ... 32 0.41
At1g08920.1 68414.m00992 sugar transporter, putative similar to ... 32 0.41
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 32 0.54
At2g18480.1 68415.m02153 mannitol transporter, putative similar ... 32 0.54
At1g06750.1 68414.m00717 hypothetical protein 31 0.94
At5g45275.1 68418.m05557 expressed protein Requires functional a... 30 1.6
At3g18830.1 68416.m02391 mannitol transporter, putative similar ... 29 3.8
At3g05400.1 68416.m00590 sugar transporter, putative similar to ... 29 3.8
At2g14500.1 68415.m01623 F-box family protein contains F-box dom... 29 5.0
At5g16150.3 68418.m01888 hexose transporter, putative strong sim... 28 6.6
At5g16150.2 68418.m01887 hexose transporter, putative strong sim... 28 6.6
At5g16150.1 68418.m01886 hexose transporter, putative strong sim... 28 6.6
At1g73220.1 68414.m08474 sugar transporter family protein contai... 28 6.6
At3g13050.1 68416.m01626 transporter-related low similarity to a... 28 8.7
At3g10890.1 68416.m01311 (1-4)-beta-mannan endohydrolase, putati... 28 8.7
At1g08900.1 68414.m00990 sugar transporter-related contains simi... 28 8.7
>At2g48020.2 68415.m06011 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 463
Score = 35.5 bits (78), Expect(2) = 0.002
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNV 649
L L+ + S SLL GA+ GA+ SGP + GRK V W+ + + V
Sbjct: 60 LSLTIAEFSLFGSLLTFGAMIGAITSGPIADLVGRKGAMRVSSAFCVVGWLAIIFAKGV 118
Score = 23.4 bits (48), Expect(2) = 0.002
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +2
Query: 236 KSSSAWRQFRISKGIHPESPRNMWAPV**TL----GAFAAGVCVAWSSSA 373
K+S A R+ + K + P W T G+FA G C +SS A
Sbjct: 3 KASDAVREPLVDKNMAGSKPDQPWMVYLSTFVAVCGSFAFGSCAGYSSPA 52
>At2g48020.1 68415.m06010 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 463
Score = 35.5 bits (78), Expect(2) = 0.002
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNV 649
L L+ + S SLL GA+ GA+ SGP + GRK V W+ + + V
Sbjct: 60 LSLTIAEFSLFGSLLTFGAMIGAITSGPIADLVGRKGAMRVSSAFCVVGWLAIIFAKGV 118
Score = 23.4 bits (48), Expect(2) = 0.002
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +2
Query: 236 KSSSAWRQFRISKGIHPESPRNMWAPV**TL----GAFAAGVCVAWSSSA 373
K+S A R+ + K + P W T G+FA G C +SS A
Sbjct: 3 KASDAVREPLVDKNMAGSKPDQPWMVYLSTFVAVCGSFAFGSCAGYSSPA 52
>At1g08930.1 68414.m00994 early-responsive to dehydration stress
protein (ERD6) / sugar transporter family protein
identical to ERD6 protein {Arabidopsis thaliana}
GI:3123712; contains Pfam profile PF00083: major
facilitator superfamily protein; contains TIGRfam
TIGR00879: Sugar transporter
Length = 496
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVY 652
L LS + S S+L LG + GAV SG + GRK+T W+ VA + N
Sbjct: 90 LSLSVAEYSMFGSILTLGGLIGAVFSGKVADVLGRKRTMLFCEFFCITGWLCVALAQNAM 149
Query: 653 GFIC 664
C
Sbjct: 150 WLDC 153
>At3g05150.1 68416.m00559 sugar transporter family protein similar
to sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 470
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILV 631
L LS +Q S S+L +GAV GA+ SG ++ GRK + W+++
Sbjct: 67 LNLSYSQFSVFGSILNMGAVLGAITSGKISDFIGRKGAMRLSSVISAIGWLII 119
>At5g27360.1 68418.m03267 sugar-porter family protein 2 (SFP2)
identical to sugar-porter family protein 2 [Arabidopsis
thaliana] GI:14585701
Length = 478
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNV 649
L+LS Q S ASL LGA GA+ SG GR+KT + W +A + +V
Sbjct: 67 LDLSIAQFSAFASLSTLGAAIGALFSGKMAIILGRRKTMWVSDLLCIIGWFSIAFAKDV 125
>At3g05155.1 68416.m00560 sugar transporter, putative similar to
sugar-porter family protein 1 [Arabidopsis thaliana]
GI:14585699; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 327
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNV 649
L+LS TQ S SLL G + GA+ S + FG K T W+ +A + N+
Sbjct: 59 LDLSITQFSVFGSLLTFGGMIGALFSATIADSFGCKMTLWITEVFCISGWLAIALAKNI 117
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 503 VASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVYGFI 661
+ S+ +GA+ GA G +Y+GRKK I++A++P+ Y I
Sbjct: 76 IVSMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLI 128
>At5g18840.1 68418.m02239 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family protein 1 [Arabidopsis thaliana]
GI:14585699; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 482
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILV 631
L LS + S S+L +GA+ GAV SG ++ GRK W+ V
Sbjct: 76 LNLSLAEFSMFGSILTIGAMLGAVMSGKISDFSGRKGAMRTSACFCITGWLAV 128
>At1g75220.1 68414.m08738 integral membrane protein, putative strong
similarity to integral membrane protein GI:1209756 from
[Beta vulgaris]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 487
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVA 634
L L+ ++ S SL +GA+ GA+ SG EY GRK + + W+ ++
Sbjct: 80 LGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLCIS 133
>At3g05165.2 68416.m00563 sugar transporter, putative similar to
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 467
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVY 652
L+LS Q S S L +G GA+ SG GR++T W+ +A + NV+
Sbjct: 62 LDLSMAQFSAFGSFLNVGGAVGALFSGQLAVILGRRRTLWACDFFCVFGWLSIAFAKNVF 121
>At3g05165.1 68416.m00562 sugar transporter, putative similar to
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 467
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVY 652
L+LS Q S S L +G GA+ SG GR++T W+ +A + NV+
Sbjct: 62 LDLSMAQFSAFGSFLNVGGAVGALFSGQLAVILGRRRTLWACDFFCVFGWLSIAFAKNVF 121
>At3g05160.1 68416.m00561 sugar transporter, putative similar to
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 458
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNV 649
L+LS Q S S L LG GA+ SG GR++T W+ +A + NV
Sbjct: 53 LDLSMAQFSAFGSFLNLGGAVGALFSGQLAVILGRRRTLWACDLFCIFGWLSIAFAKNV 111
>At1g54730.2 68414.m06240 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 470
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 440 NSTYDENFKTRLELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVS 619
+S + L LS + S S+L +GA+ GA SG + GR+ T +
Sbjct: 53 SSPVQSDLTKELNLSVAEYSLFGSILTIGAMIGAAMSGRIADMIGRRATMGFSEMFCILG 112
Query: 620 WILV 631
W+ +
Sbjct: 113 WLAI 116
>At1g19450.1 68414.m02423 integral membrane protein, putative /
sugar transporter family protein similar to GB:U43629
GI:1209756 integral membrane protein from [Beta
vulgaris]; contains Pfam profile PF00083: major
facilitator superfamily protein; contains TIGRfam
TIGR00879: Sugar transporter
Length = 488
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVA 634
L L+ ++ S SL +GA+ GA+ SG EY GRK + + W+ ++
Sbjct: 81 LGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLSIS 134
>At1g08920.2 68414.m00993 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 477
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVA 634
L LS Q S S++ G + GA+ SG + GRK T W+ VA
Sbjct: 64 LGLSVAQYSMFGSIMTFGGMIGAIFSGKVADLMGRKGTMWFAQIFCIFGWVAVA 117
>At1g08920.1 68414.m00992 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 470
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVA 634
L LS Q S S++ G + GA+ SG + GRK T W+ VA
Sbjct: 64 LGLSVAQYSMFGSIMTFGGMIGAIFSGKVADLMGRKGTMWFAQIFCIFGWVAVA 117
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASS 640
L LS + S+ ++L +G + GA SG + FGR+ W+++A S
Sbjct: 85 LNLSLAEFSFFGAVLTIGGLVGAAMSGKLADVFGRRGALGVSNSFCMAGWLMIAFS 140
>At2g18480.1 68415.m02153 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 508
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPN 646
L+++DTQ +A +L L A+ G++ +G + GR+ T V +L+ PN
Sbjct: 54 LKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPN 111
>At1g06750.1 68414.m00717 hypothetical protein
Length = 495
Score = 31.1 bits (67), Expect = 0.94
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 350 RLQRQKHPRFTIPVPTYCVVIPDVSLLISGIVSMRTRTLGW 228
R Q + H RF PTYC ++ + L + + + +GW
Sbjct: 371 RSQLRSHKRFAEAFPTYCSLVDNARLYCTNALEGSPKLIGW 411
>At5g45275.1 68418.m05557 expressed protein Requires functional
assignment.
Length = 570
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Frame = +2
Query: 443 STYDENFKTRLELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFG----RKKTXXXXXXXX 610
STY N K+ L +S Q +++A LG VFG SG YF
Sbjct: 28 STYSSNLKSVLGISQVQLNYLAVASDLGKVFG-WSSGLALLYFPLWTVLFAAAIMGFVGY 86
Query: 611 XVSWIL---VASSPNVYGFICRXICGXNXC 691
V W++ V S P + F+C + G + C
Sbjct: 87 GVQWLVITNVISLPYILVFLCCLLAGLSIC 116
>At3g18830.1 68416.m02391 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 539
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 464 KTRLELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSP 643
K L+++D Q +A L + ++ G+ +G ++ GR+ T IL+ SP
Sbjct: 65 KRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSP 124
Query: 644 NVYGFI 661
N Y F+
Sbjct: 125 N-YAFL 129
>At3g05400.1 68416.m00590 sugar transporter, putative similar to
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701, integral membrane
protein GB:U43629 from [Beta vulgaris]; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 462
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNV 649
L+LS Q S SL G + GA+ S FG K T W+ ++ + ++
Sbjct: 58 LDLSLAQFSLFGSLSTFGGMIGAIFSAKAASAFGHKMTLWVADLFCITGWLAISLAKDI 116
>At2g14500.1 68415.m01623 F-box family protein contains F-box domain
Pfam:PF00646
Length = 347
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 146 DKWKNKVHRLWKPKHCRGMWNSGTVKMATPKSSSAWRQFRISKGIH 283
D +N +RL R WNS + + A PK+ S W +G+H
Sbjct: 15 DLLRNIFNRLSFADFHRATWNSISKQTAPPKTKSPWLILFPDEGVH 60
>At5g16150.3 68418.m01888 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 500 WVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVYGFI 661
W+ S L GA G+ G + FGR +T + L A++ +V I
Sbjct: 148 WIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMI 201
>At5g16150.2 68418.m01887 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 500 WVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVYGFI 661
W+ S L GA G+ G + FGR +T + L A++ +V I
Sbjct: 148 WIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMI 201
>At5g16150.1 68418.m01886 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 500 WVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNVYGFI 661
W+ S L GA G+ G + FGR +T + L A++ +V I
Sbjct: 148 WIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMI 201
>At1g73220.1 68414.m08474 sugar transporter family protein contains
Pfam profile: PF00083 sugar (and other) transporter
Length = 539
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 506 ASLLCLGAVFGAVPSGPDXE-YFGRKKTXXXXXXXXXVSWILVASSPNVY 652
++L +G++FG+ G + +FGRKKT V+ ++ SPNV+
Sbjct: 140 STLFFIGSLFGSGVYGYLADSWFGRKKTLLLSCVLTFVTAFAISFSPNVW 189
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 479 LSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPN-VYG 655
LS Q S + S++ G + GA G + GR+K V+ L A SPN ++
Sbjct: 57 LSARQESLITSVVFAGMLIGAYSWGIVSDKHGRRKGFIITAVVTFVAGFLSAFSPNYMWL 116
Query: 656 FICRXICGXNXCG 694
I R + G G
Sbjct: 117 IILRCLVGLGLGG 129
>At3g10890.1 68416.m01311 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 414
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 377 PLLITEYGKDYTTPIPDWAEQNSTYDENFKTRLELSDTQGSWVASL 514
PL++ E+GK TP A++++ ++ F T E ++ G +L
Sbjct: 318 PLILGEFGKPTNTPGYTQAQRDAVFNATFDTIYESAEKGGPAAGAL 363
>At1g08900.1 68414.m00990 sugar transporter-related contains
similarity to sugar-porter family protein 2 GI:14585701
from [Arabidopsis thaliana]
Length = 264
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 473 LELSDTQGSWVASLLCLGAVFGAVPSGPDXEYFGRKKTXXXXXXXXXVSWILVASSPNV 649
L LS S+ S++ LG + AV SG GR++T W+ VA + ++
Sbjct: 57 LGLSVADYSFFTSVMTLGGMITAVFSGKISALVGRRQTMWISDVCCIFGWLAVAFAHDI 115
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,079,068
Number of Sequences: 28952
Number of extensions: 434902
Number of successful extensions: 1216
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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