Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I19
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0382 - 22501041-22501279,22501717-22501810                       30   2.0  
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           30   2.0  
03_06_0471 + 34169562-34169892,34170121-34170347                       29   3.5  
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    29   4.6  

>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 286 DYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARGG 402
           D  P+ + Y+P  +  YY DPP    Y+ P P P   GG
Sbjct: 55  DPPPSPDYYDPPHSPDYY-DPPPSPDYYDPPPSPYYGGG 92


>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +1

Query: 271 VNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRPYFKPTPFPGARG 399
           V PP  Y P  +G  P     N + Y +PP GRP   P P  GA G
Sbjct: 404 VRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAGG 448


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +1

Query: 277 PPKDYNPNGNGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 390
           PP  Y P+  GY P   GAY   PP G   +P + P  +PG
Sbjct: 68  PPSGYPPSQGGYPP---GAY---PPSGYPQQPGYPPAGYPG 102


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 280 PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 375
           P    P G  Y P   G  Y  PP+G+P + P
Sbjct: 276 PYPPQPQGQPYPPQPYGQTYPPPPKGQPTYPP 307


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,256,011
Number of Sequences: 37544
Number of extensions: 399341
Number of successful extensions: 708
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)