Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I18
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    26   0.33 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.58 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   3.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   3.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   3.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.5  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 634 YYXPWYNSYFQQTXTSPTLY 693
           Y  PWYN Y+ Q   +  LY
Sbjct: 33  YCDPWYNPYYYQYLQNAALY 52


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 270 CPCTHSSSVQTPSTSGILCLEEKQQPEL 187
           C CTH   +   +   I+ ++E QQP L
Sbjct: 566 CMCTHKVDIPLNAIVEIVLVDEVQQPNL 593


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 294 SRTRIMHKNLKAKEEGQCSNGSCKI 368
           ++TR++H++L A+    C N + K+
Sbjct: 609 AKTRVVHRDLAARNVLVCENHTVKV 633


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 616 LNLMLVYYXPWYNSYFQQTXTSPTL 690
           +NL   +   W NS++Q   T+P L
Sbjct: 1   MNLSAQFSDYWTNSFYQNYKTNPFL 25


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 270 CPCTHSSSVQTPSTSGILCLEEKQQPEL 187
           C CTH   +   +   ++ ++E Q P L
Sbjct: 566 CMCTHQVDIPLNAIVEVVLVDEVQSPNL 593


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 616 LNLMLVYYXPWYNSYFQQTXTSPTL 690
           +NL   +   W NS++Q   T+P L
Sbjct: 1   MNLSAQFSDYWTNSFYQNYKTNPFL 25


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 616 LNLMLVYYXPWYNSYFQQTXTSPTL 690
           +NL   +   W NS++Q   T+P L
Sbjct: 1   MNLSAQFSDYWTNSFYQNYKTNPFL 25


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 238 SLDTGAMSARANARS*FVLHVHESCIRI*KPKKKVNAA 351
           S+D GA+ A   ++   +L   E C+++  P+K   AA
Sbjct: 311 SID-GALEAGPYSKEEGLLSYPEVCVKLANPQKLTTAA 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,887
Number of Sequences: 336
Number of extensions: 2693
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)