Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I17
(913 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 122 1e-26
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 113 8e-24
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 108 2e-22
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 89 1e-16
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 83 1e-14
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 83 1e-14
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 81 3e-14
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 77 8e-13
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 74 4e-12
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 69 1e-10
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 66 9e-10
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 60 6e-08
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 56 9e-07
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 56 2e-06
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 48 3e-04
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 48 3e-04
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 48 3e-04
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 43 0.009
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 43 0.009
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 40 0.088
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 40 0.088
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 38 0.36
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 38 0.47
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 38 0.47
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 37 0.62
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 37 0.82
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 37 0.82
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 36 1.4
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 36 1.4
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 36 1.9
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 36 1.9
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 35 3.3
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 35 3.3
UniRef50_A6EWZ2 Cluster: Beta-ketoacyl synthase; n=1; Marinobact... 34 5.8
UniRef50_A4YSY7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 122 bits (295), Expect = 1e-26
Identities = 59/77 (76%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Frame = +2
Query: 155 LVVSGKDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 331
+ + KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPT
Sbjct: 1 MAAAPKDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPT 60
Query: 332 KILRITTRKTPCGEGSK 382
K LRITTRKTPCGEGSK
Sbjct: 61 KTLRITTRKTPCGEGSK 77
Score = 79.8 bits (188), Expect = 9e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
DRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 80 DRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 113 bits (271), Expect = 8e-24
Identities = 56/72 (77%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = +2
Query: 170 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 346
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 347 TTRKTPCGEGSK 382
TTRKTPCGEGSK
Sbjct: 64 TTRKTPCGEGSK 75
Score = 82.2 bits (194), Expect = 2e-14
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 516
DRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 78 DRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 108 bits (259), Expect = 2e-22
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +2
Query: 179 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 358
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 359 TPCGEGSK 382
TP GEGSK
Sbjct: 68 TPNGEGSK 75
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIA 510
+ ++MRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIA
Sbjct: 78 ETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEVTIA 117
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 89.4 bits (212), Expect = 1e-16
Identities = 43/75 (57%), Positives = 56/75 (74%)
Frame = +2
Query: 158 VVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKI 337
+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPTK+
Sbjct: 4 MIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPTKV 61
Query: 338 LRITTRKTPCGEGSK 382
LR+TTRKTPCGEGSK
Sbjct: 62 LRVTTRKTPCGEGSK 76
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIA 510
DRFQ+RIHKRVIDL S E Q+ I +EPGV +V ++
Sbjct: 79 DRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGVNCDVIVS 118
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/57 (71%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = +2
Query: 170 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKI 337
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV 60
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/72 (54%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Frame = +2
Query: 170 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 346
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 347 TTRKTPCGEGSK 382
T RK+PCGEGSK
Sbjct: 64 TVRKSPCGEGSK 75
Score = 46.8 bits (106), Expect = 8e-04
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 507
DRF+MRI+KR+IDL VK IT+ I+PGV +E+T+
Sbjct: 78 DRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEIELTM 116
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 81.4 bits (192), Expect = 3e-14
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +2
Query: 170 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 349
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 350 TRKTPCGEGSK 382
TRKTPCGEGSK
Sbjct: 65 TRKTPCGEGSK 75
Score = 50.4 bits (115), Expect = 6e-05
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
D +QMRI+KRV+ + + E VK+ITS+ +EPGV +EV + D
Sbjct: 78 DHYQMRIYKRVLSMKTTPETVKEITSLKVEPGVELEVAMFD 118
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
DRFQMRIHKRVIDL+SPSEIVKQITSI++EPGV VEVTIA+
Sbjct: 442 DRFQMRIHKRVIDLYSPSEIVKQITSISLEPGVEVEVTIAN 482
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +2
Query: 272 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 382
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSK
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSK 439
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 74.1 bits (174), Expect = 4e-12
Identities = 31/67 (46%), Positives = 49/67 (73%)
Frame = +2
Query: 179 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 358
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 359 TPCGEGS 379
TPCG G+
Sbjct: 65 TPCGNGT 71
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
D F+++I+KR+IDLH+P+E VK+ITS +E GV V +TI D
Sbjct: 75 DTFELKIYKRIIDLHAPTEQVKKITSFTMESGVDVSITILD 115
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/75 (42%), Positives = 49/75 (65%)
Frame = +2
Query: 158 VVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKI 337
VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ MP +
Sbjct: 5 VVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPMPRRR 64
Query: 338 LRITTRKTPCGEGSK 382
LRITTR+ PCG G++
Sbjct: 65 LRITTRRAPCGNGTE 79
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 507
D F++RI+KRVID +E VKQ+T I +EP V VEV++
Sbjct: 82 DHFELRIYKRVIDFQGTAEAVKQVTQIALEPDVHVEVSV 120
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 66.5 bits (155), Expect = 9e-10
Identities = 26/55 (47%), Positives = 41/55 (74%)
Frame = +2
Query: 215 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 379
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PCGEG+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGT 70
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 507
D+F+M+IHKR+ID HS IT IN++ G+ ++ I
Sbjct: 74 DKFEMKIHKRIIDFHSNKSEFNSITPINLDNGIEIDAQI 112
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 60.5 bits (140), Expect = 6e-08
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +1
Query: 400 QMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 516
+M+IH ++IDL SPSEIVKQITS++IEP V EVTIADA
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 56.4 bits (130), Expect = 9e-07
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 218 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 382
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTE 60
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 55.6 bits (128), Expect = 2e-06
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Frame = +2
Query: 179 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 340
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 341 RITTRKTPCGEGSK 382
++T RK+PCGEGSK
Sbjct: 66 KMTVRKSPCGEGSK 79
Score = 45.6 bits (103), Expect = 0.002
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 507
DRF+MRIHKRVID K IT+ I PG+ VE+ +
Sbjct: 82 DRFEMRIHKRVIDFQCTLPTFKDITNFKIGPGINVELNV 120
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 48.4 bits (110), Expect = 3e-04
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +2
Query: 203 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEG 376
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQG 76
Score = 36.7 bits (81), Expect = 0.82
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 507
D ++MRIHKRV+D+ + ++Q+ + I V VE+ +
Sbjct: 81 DHWEMRIHKRVVDMDADERALRQLMRLRIPEDVKVEIEL 119
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 48.4 bits (110), Expect = 3e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 212 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 382
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P GEGS+
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSE 63
Score = 36.3 bits (80), Expect = 1.1
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 507
D ++MR+HKR+ID+ + ++QI I + V +E+ +
Sbjct: 66 DHWEMRVHKRLIDISADERALRQIMRIQVPRDVNIEIVL 104
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +2
Query: 203 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 382
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Score = 36.3 bits (80), Expect = 1.1
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 507
D ++MRIHKR+ID+ ++++ I I + V +E+ I
Sbjct: 65 DHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNVYIEIQI 103
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +2
Query: 212 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 382
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG K
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKK 60
Score = 35.9 bits (79), Expect = 1.4
Identities = 10/43 (23%), Positives = 28/43 (65%)
Frame = +1
Query: 379 KRPGDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 507
K+ + ++M++HKR+ID+ + +++Q+ + + V +E+ +
Sbjct: 59 KKKWEHWEMKVHKRIIDIAADERVMRQLMRVRVPDDVYIEIEL 101
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 206 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 364
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP 53
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 39.9 bits (89), Expect = 0.088
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +2
Query: 221 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 379
I + ++++ +E+ ++ + + GP R P + L ITTRK+PCGEG+
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPCGEGT 77
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 39.9 bits (89), Expect = 0.088
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +2
Query: 209 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 364
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP 54
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 37.9 bits (84), Expect = 0.36
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 188 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 334
QA +IRI L S ++ C ++ AK + RV GPV +PTK
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTK 79
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 37.5 bits (83), Expect = 0.47
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 212 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 364
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSP 53
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 37.5 bits (83), Expect = 0.47
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 158 VVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKI 337
V S I +++P +IRI L S V +E C +++ A+ + GPV +PTK
Sbjct: 76 VPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKK 135
Query: 338 LRITTRKTP 364
K+P
Sbjct: 136 RIYCVLKSP 144
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 37.1 bits (82), Expect = 0.62
Identities = 15/46 (32%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +1
Query: 373 RFKRPGDRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVXVEVTI 507
+FK ++F+MR HKR+ID+ +P+ + V + +++ GV +E+ +
Sbjct: 57 KFKDSREQFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVDIEIKL 102
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 36.7 bits (81), Expect = 0.82
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 212 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 364
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP 55
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 36.7 bits (81), Expect = 0.82
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 212 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 364
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP 55
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +2
Query: 215 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 382
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+ + G+K
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTK 59
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/46 (30%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +1
Query: 373 RFKRPGDRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVXVEVTI 507
++K ++F+MR HKR+ID+ +P+ + V + +++ GV +E+ +
Sbjct: 57 KYKDSREQFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL 102
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 35.5 bits (78), Expect = 1.9
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 212 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 364
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP 64
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 35.5 bits (78), Expect = 1.9
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 212 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 364
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSP 55
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 206 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTP 364
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSP 56
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 34.7 bits (76), Expect = 3.3
Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 391 DRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVXVEVTI 507
+ F+ R H+R+ID++SPS + + + +++ GV +EV +
Sbjct: 67 EHFETRTHRRIIDIYSPSAKTIDALMKLDLPSGVDIEVKL 106
>UniRef50_A6EWZ2 Cluster: Beta-ketoacyl synthase; n=1; Marinobacter
algicola DG893|Rep: Beta-ketoacyl synthase -
Marinobacter algicola DG893
Length = 2227
Score = 33.9 bits (74), Expect = 5.8
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 NVRFLRFSAEQFLIEKLFISAGIQQAT-WQPLVVSGKDIEKPQAEVSPIHRIRITLTSRN 241
N F+ FS++Q ++ +S W PL+ G + P+ +V HRIR + R
Sbjct: 181 NTDFISFSSDQTFLQLSALSFDASTLELWGPLLNGGTCVLHPETDVLTPHRIRDVILERG 240
Query: 242 VRSL 253
V +L
Sbjct: 241 VSTL 244
>UniRef50_A4YSY7 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain ORS278)
Length = 104
Score = 33.5 bits (73), Expect = 7.7
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 104 IEKLFISAGIQQATWQPLVVSGKD-IEKPQAEVSPIHRIRITLTSRNVRSLEK 259
+EKL ++AG+ Q WQ V +G+D I+ P ++ H + T+R VR L K
Sbjct: 21 VEKLRVAAGVGQNRWQ-RVAAGRDRIDLPGNDLPEGHAEALAGTARQVRRLVK 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,941,068
Number of Sequences: 1657284
Number of extensions: 11461945
Number of successful extensions: 24388
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 23823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24383
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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