Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I17
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514          100   3e-21
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294           99   4e-21
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923           98   7e-21
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504...    36   0.045
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348...    29   6.8  
03_06_0314 - 33077621-33077869,33078218-33078280,33079392-330794...    29   6.8  

>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
          Length = 130

 Score = 99.5 bits (237), Expect = 3e-21
 Identities = 44/73 (60%), Positives = 60/73 (82%)
 Frame = +2

Query: 161 VSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKIL 340
           + G  +   +A    ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKGPVR+PTK+L
Sbjct: 13  MKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIPTKVL 72

Query: 341 RITTRKTPCGEGS 379
            ITTRK+PCGEG+
Sbjct: 73  HITTRKSPCGEGT 85



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +1

Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
           DRF+ RIHKRVIDL S  ++VKQITSI IEPGV VEVTIAD
Sbjct: 89  DRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIAD 129


>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
          Length = 127

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 44/73 (60%), Positives = 60/73 (82%)
 Frame = +2

Query: 161 VSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKIL 340
           + G  +   +A    ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKGPVR+PTK+L
Sbjct: 10  MKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIPTKVL 69

Query: 341 RITTRKTPCGEGS 379
            ITTRK+PCGEG+
Sbjct: 70  HITTRKSPCGEGT 82



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +1

Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
           DRF+ RIHKRVIDL S  ++VKQITSI IEPGV VEVTIAD
Sbjct: 86  DRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIAD 126


>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
          Length = 128

 Score = 98.3 bits (234), Expect = 7e-21
 Identities = 47/78 (60%), Positives = 61/78 (78%)
 Frame = +2

Query: 146 WQPLVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 325
           + P + SGK   +   EV   HRIRITL+S++V++LEKVC DL+ GAK + L+VKGPVRM
Sbjct: 8   YAPPMKSGKIGFESSQEVQ--HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRM 65

Query: 326 PTKILRITTRKTPCGEGS 379
           PTK+L ITTRK+PCGEG+
Sbjct: 66  PTKVLHITTRKSPCGEGT 83



 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +1

Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
           DRF+MR+HKRVIDL S +++VKQITSI IEPGV VEVTI+D
Sbjct: 87  DRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISD 127


>03_02_0020 -
           5045900-5046211,5046233-5046290,5046604-5047242,
           5048475-5048515,5048672-5048728,5048952-5049140
          Length = 431

 Score = 35.9 bits (79), Expect = 0.045
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +2

Query: 197 VSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 334
           ++P  +IRI L S  V  +E  C  +I  AK    +  GPV +PTK
Sbjct: 329 LAPKQKIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPTK 374



 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 397 FQMRIHKRVIDLHSP-SEIVKQITSINIEPGVXVEVTI 507
           F++R H+R+ID+  P ++ +  +  + +  GV VEV +
Sbjct: 394 FEIRTHQRLIDIMYPTAQTIDSLMQLQLPAGVDVEVKL 431


>06_02_0345 +
           14833838-14833997,14834095-14834552,14834633-14834870,
           14834974-14835431,14836554-14836955
          Length = 571

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +1

Query: 214 HQDHSYFSQCALTREGLC*PNQWSQETEAACKG--PSPH---ANQDPA 342
           H   S   +CAL R+G     +W  ET   C G  P+P     +QDPA
Sbjct: 11  HHLQSTLFECALLRDGRAESFEWLFETFKNCMGNCPTPRCILTDQDPA 58


>03_06_0314 -
           33077621-33077869,33078218-33078280,33079392-33079449,
           33079534-33079688,33079797-33080106,33080634-33080890,
           33081280-33081359,33083888-33083948
          Length = 410

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 241 CALTREGLC*PNQWSQETEAACKGPSP 321
           C L  EGL   ++W++   A  +GPSP
Sbjct: 155 CRLAAEGLVTASKWARPGRAGTRGPSP 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,377,448
Number of Sequences: 37544
Number of extensions: 325751
Number of successful extensions: 721
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)