Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I17
         (913 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   122   5e-28
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   122   5e-28
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   122   5e-28
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   118   1e-26

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  122 bits (295), Expect = 5e-28
 Identities = 59/77 (76%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
 Frame = +2

Query: 155 LVVSGKDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 331
           +  + KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPT
Sbjct: 1   MAAAPKDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPT 60

Query: 332 KILRITTRKTPCGEGSK 382
           K LRITTRKTPCGEGSK
Sbjct: 61  KTLRITTRKTPCGEGSK 77



 Score = 79.8 bits (188), Expect = 5e-15
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
           DRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 80  DRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  122 bits (295), Expect = 5e-28
 Identities = 59/77 (76%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
 Frame = +2

Query: 155 LVVSGKDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 331
           +  + KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPT
Sbjct: 1   MAAAPKDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPT 60

Query: 332 KILRITTRKTPCGEGSK 382
           K LRITTRKTPCGEGSK
Sbjct: 61  KTLRITTRKTPCGEGSK 77



 Score = 79.8 bits (188), Expect = 5e-15
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
           DRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 80  DRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  122 bits (295), Expect = 5e-28
 Identities = 59/77 (76%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
 Frame = +2

Query: 155 LVVSGKDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 331
           +  + KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPT
Sbjct: 1   MAAAPKDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPT 60

Query: 332 KILRITTRKTPCGEGSK 382
           K LRITTRKTPCGEGSK
Sbjct: 61  KTLRITTRKTPCGEGSK 77



 Score = 79.8 bits (188), Expect = 5e-15
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
           DRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 80  DRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  118 bits (283), Expect = 1e-26
 Identities = 57/77 (74%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = +2

Query: 155 LVVSGKDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 331
           +  + KDIEKP   + + +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPT
Sbjct: 1   MAAAPKDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPT 60

Query: 332 KILRITTRKTPCGEGSK 382
           K LRITTRKTPCGEGSK
Sbjct: 61  KTLRITTRKTPCGEGSK 77



 Score = 79.8 bits (188), Expect = 5e-15
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 391 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 513
           DRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 80  DRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,153,994
Number of Sequences: 53049
Number of extensions: 555557
Number of successful extensions: 1200
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)