Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I16
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 0.12
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.50
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 0.54
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 25 0.58
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.66
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 0.92
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 24 2.2
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 27 2.7
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 27 2.7
SPAC23C4.07 |tht2|mug22|meiotically upregulated gene Mug22|Schiz... 26 6.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 8.1
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 845 PPPPPPPXP 871
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect(2) = 0.12
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 848 PPPPPPXPP 874
PPPPPP PP
Sbjct: 306 PPPPPPPPP 314
Score = 24.2 bits (50), Expect(2) = 0.12
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 830 NXPXXPPPPPPP 865
N PPPPPPP
Sbjct: 302 NGGLPPPPPPPP 313
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.50
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -2
Query: 401 PP*LVLSPAGPKTLVP*A*PVSLPRSSLKIXLL*PAFPKSPSSFCPKVPKTLPPPICLSQ 222
PP +P P +L P A P + +S P+ P PS+ P PK PPP+ +
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSP-------PSAPSLPSAVPPMPPKVPPPPLSQAP 210
Query: 221 VTSRGCR 201
V + R
Sbjct: 211 VANTSSR 217
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 836 PXXPPPPPPPXP 871
P PPPPPPP P
Sbjct: 942 PAFPPPPPPPPP 953
Score = 26.2 bits (55), Expect(2) = 0.54
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 848 PPPPPPXPP 874
PPPPPP PP
Sbjct: 945 PPPPPPPPP 953
Score = 21.8 bits (44), Expect(2) = 0.54
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 836 PXXPPPPPPP 865
P PPPPP P
Sbjct: 905 PTPPPPPPLP 914
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 24.6 bits (51), Expect(2) = 0.58
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 830 NXPXXPPPPPPP 865
N PPPPPPP
Sbjct: 365 NISYSPPPPPPP 376
Score = 23.4 bits (48), Expect(2) = 0.58
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 851 PPPPPXPP 874
PPPPP PP
Sbjct: 370 PPPPPPPP 377
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.66
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 809 YXPXLFXNXPXXPPPPPPPXPP 874
Y P P PPPPPP PP
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 845 PPPPPPPXP 871
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 848 PPPPPPXPP 874
PPPPPP PP
Sbjct: 189 PPPPPPPPP 197
Score = 22.6 bits (46), Expect(2) = 7.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 847 PPPPXPPPXP 876
PPPP PP P
Sbjct: 238 PPPPPPPTLP 247
Score = 21.4 bits (43), Expect(2) = 7.1
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +1
Query: 826 PKXXXXXPPPPXPP 867
P PPPP PP
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 845 PPPPPPPXP 871
PPPPPPP P
Sbjct: 775 PPPPPPPPP 783
Score = 26.2 bits (55), Expect(2) = 0.92
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 848 PPPPPPXPP 874
PPPPPP PP
Sbjct: 775 PPPPPPPPP 783
Score = 21.0 bits (42), Expect(2) = 0.92
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 845 PPPPPP 862
PPPPPP
Sbjct: 732 PPPPPP 737
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 845 PPPPPPP 865
PPPPPPP
Sbjct: 311 PPPPPPP 317
Score = 23.8 bits (49), Expect(2) = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 845 PPPPPPP 865
PPPPPPP
Sbjct: 337 PPPPPPP 343
Score = 22.2 bits (45), Expect(2) = 2.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 821 LFXNXPXXPPPPPP 862
L N PPPPPP
Sbjct: 304 LAANKKRPPPPPPP 317
Score = 20.6 bits (41), Expect(2) = 6.0
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 854 PPPPXPP 874
PPPP PP
Sbjct: 337 PPPPPPP 343
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 290 PKSPS-SFCPKVPKTLPPPICLSQVTS 213
P SP SF +VP +PPP+C V S
Sbjct: 165 PISPDYSFPLRVPINIPPPLCTPSVVS 191
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 92 IQICFISSLQLWCVLTQKFTDLLITRKITRSAGNPQGDTLVTSLGTNKWGEARSL 256
+ I + + LW + +KF D+ + ++ AGN +G L LGT + A+ L
Sbjct: 199 LDISDVCGMNLWDIQNEKF-DIRLLEEV---AGNSKGPDLANKLGTVEINGAKHL 249
>SPAC23C4.07 |tht2|mug22|meiotically upregulated gene
Mug22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 201
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 77 YNSK*IQICFISSLQLWCVLTQKFTDLL 160
Y+ K +++ +S + W VLTQ +TD L
Sbjct: 153 YHRKQMELQMLSFVAEWLVLTQHYTDAL 180
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 836 PXXPPPPPPP 865
P PPPPPPP
Sbjct: 6 PGNPPPPPPP 15
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 836 PXXPPPPPPP 865
P PPPPPPP
Sbjct: 21 PSQPPPPPPP 30
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,087,325
Number of Sequences: 5004
Number of extensions: 60143
Number of successful extensions: 331
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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