Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I14
         (850 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...   112   1e-23
UniRef50_A5W9C8 Cluster: Putative uncharacterized protein; n=2; ...    36   0.97 
UniRef50_A7HUA6 Cluster: Acyl-CoA dehydrogenase domain protein; ...    33   9.1  
UniRef50_A7PXL8 Cluster: Chromosome chr12 scaffold_36, whole gen...    33   9.1  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score =  112 bits (269), Expect = 1e-23
 Identities = 77/191 (40%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
 Frame = +3

Query: 111 MAAKFVV-LFACIALAQGAMVRRDAP---DFFKDIEHHTKXVP*----DFRTTV*LAHQV 266
           MAAKFVV L AC+AL+  AMVRRDAP   + F+++E H K         F + V   +  
Sbjct: 1   MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQ 60

Query: 267 KGRTGLQQGLEGRLRVRAATAQRLRQESPXERSETRTARPRRLWNXXXXXXXXXXXXXXX 446
                L+ G +  L+  +A +  L+        + + A  +   N               
Sbjct: 61  DFNKALKDGSDSVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAHP-- 118

Query: 447 XXLNVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVXETNEXLAPKIKAXYDXFAKNT 626
              +VEK A A ++KLQAAVQ TVQESQKLAK+V+SN+ ETN+ LAPKIK  YD F K+ 
Sbjct: 119 ---DVEKEANAFKDKLQAAVQTTVQESQKLAKEVASNMEETNKKLAPKIKQAYDDFVKHA 175

Query: 627 QEVIQKIQEAA 659
           +EV +K+ EAA
Sbjct: 176 EEVQKKLHEAA 186



 Score = 65.3 bits (152), Expect = 2e-09
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = +1

Query: 223 FHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQ 354
           F KT  +QFNSL  SK+ QDF+KA KDGS+SVLQQL+AF+ SLQ
Sbjct: 42  FQKTFSEQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSLQ 85



 Score = 54.4 bits (125), Expect = 3e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +2

Query: 356 GALGDANGKAKEALEQSXQNIERTAEELRK 445
           GA+ DANGKAKEALEQ+ QN+E+TAEELRK
Sbjct: 86  GAISDANGKAKEALEQARQNVEKTAEELRK 115


>UniRef50_A5W9C8 Cluster: Putative uncharacterized protein; n=2;
           Gammaproteobacteria|Rep: Putative uncharacterized
           protein - Pseudomonas putida F1
          Length = 730

 Score = 36.3 bits (80), Expect = 0.97
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +3

Query: 474 TALREKLQAAVQNTVQESQKLAKKVSSNVXETNEXLAPKIKAXYDXFAKNTQEVIQKIQE 653
           T LRE LQ  V   V+ES KLA  +S+   ++ + LA ++    +   K+  E I    +
Sbjct: 253 TDLREMLQNLVDTQVRESLKLADTLSTTYRDSGQLLADQVSGAIENSLKSPLEAIAGAVQ 312

Query: 654 AAN 662
           AA+
Sbjct: 313 AAS 315


>UniRef50_A7HUA6 Cluster: Acyl-CoA dehydrogenase domain protein;
           n=8; Bacteria|Rep: Acyl-CoA dehydrogenase domain protein
           - Parvibaculum lavamentivorans DS-1
          Length = 364

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 302 SFQALLKSCASFDLVSELNCCSKVLWNXLGVVFD-VLEEVGSVASHHRSL 156
           SFQA+   CA  ++ SEL  C  ++W   G  FD V EE   +A+H +SL
Sbjct: 258 SFQAVKHMCA--EMASELEPCRSLIW-YAGHAFDEVPEESSLMAAHAKSL 304


>UniRef50_A7PXL8 Cluster: Chromosome chr12 scaffold_36, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr12 scaffold_36, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 2300

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +2

Query: 98  STVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIR 232
           S+ +HGR++ S  R+ R G  SDG+ R+     G    H GS IR
Sbjct: 249 SSKNHGRELVSRTRMKRYGTDSDGSERKH---HGEYGDHMGSKIR 290


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,604,792
Number of Sequences: 1657284
Number of extensions: 8749590
Number of successful extensions: 30763
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30732
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)