Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I14
         (850 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751...    30   2.0  
03_05_0373 + 23581812-23583293                                         30   2.0  
01_01_0401 + 3043634-3043894,3045610-3045849                           30   2.7  
05_03_0100 + 8391700-8392390,8392531-8392812,8393767-8394317           29   3.5  

>12_02_1035 -
           25570009-25571241,25571940-25573709,25573797-25575118,
           25575208-25575555,25576540-25576633
          Length = 1588

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 486 EKLQAAVQNTVQESQKLAKKVSSNVXETNEXLAPKIKAXYDXFAKNTQE 632
           EKLQ  + +  QE+Q+L KK+SS V E ++    ++ +  +  A+   E
Sbjct: 153 EKLQKEISSLSQENQELKKKISS-VLENSDRAESEVASLKEALAQQEAE 200


>03_05_0373 + 23581812-23583293
          Length = 493

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -3

Query: 461 DVQGGPCGAPRPCARCSASTVPKPPW 384
           D  GG   A    +RCSAST PK PW
Sbjct: 53  DGAGGYGSAASSPSRCSASTPPKSPW 78


>01_01_0401 + 3043634-3043894,3045610-3045849
          Length = 166

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
 Frame = -3

Query: 479 GGGVLLDVQGGPCGAPRPCARCSASTVP----KP---PWPCRSXXXXXXXXXXXXXLSCC 321
           GGG    +   P  +P   A+C A  VP    +P   P P R                 C
Sbjct: 23  GGGGGKKLHQSPPPSPPEAAKCCADGVPVVMGEPLGAPAPPRESWNSGVLSCLGRNDEFC 82

Query: 320 STDSEPSFQALLKSC 276
           S+D E SF+A  K C
Sbjct: 83  SSDVEGSFEAFTKQC 97


>05_03_0100 + 8391700-8392390,8392531-8392812,8393767-8394317
          Length = 507

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = +3

Query: 552 SNVXETNEXLAPKIKAXYDXFAKNTQEVIQKIQEAANAXAVSVHIELSTLNXY 710
           SNV   N+ LA K+K   +   +NT + ++ ++         +H++ S+L  +
Sbjct: 394 SNVTSVNDELAKKLKKIIEANNENTADCLRIVKLTCQVVIAIIHLKPSSLKDF 446


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,213,579
Number of Sequences: 37544
Number of extensions: 268306
Number of successful extensions: 983
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)