Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I14
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.2  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +3

Query: 192 FKDIEHHTKXVP*DFRTTV*LAHQVKGRTGLQQGLEGRLRVRAATAQRLRQESPXERSET 371
           +K +E HT+      R    +    K    L+QG++  L +  A     R  SP E +E+
Sbjct: 332 YKQLELHTED-----RAAESILEPAKKGFKLKQGIQFHLYINTAPCGDARIFSPHEENES 386

Query: 372 RTARPRR 392
               P R
Sbjct: 387 VDKHPNR 393


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 50  TPLCCSPVRISSALSLSTVHHGRQVRSSLRLH 145
           T L CS  R    LS+S +  GR +  S R+H
Sbjct: 628 TTLTCSVTRGDLPLSISWLKDGRAMGPSERVH 659


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 564 ETNEXLAPKIKAXYDXFAKNTQEVIQKIQEAANAXAV 674
           E N  +A  +K       +   ++IQ++ + ANA AV
Sbjct: 164 ERNVCIAAAVKVPSAADDRMFDDIIQRLSKKANARAV 200


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 170 HHRSLGQSDAGEENYELGGHDVL 102
           HH+    + AG +   L GH VL
Sbjct: 920 HHQIQVSTSAGLQTIRLSGHSVL 942


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 564 ETNEXLAPKIKAXYDXFAKNTQEVIQKIQEAANAXAV 674
           E N  +A  +K       +   ++IQ++ + ANA AV
Sbjct: 254 ERNVCIAAAVKVPSAADDRMFDDIIQRLSKKANARAV 290


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,386
Number of Sequences: 438
Number of extensions: 2434
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)