Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I11
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    28   0.10 
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   8.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.7  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 283 FCEFCRRVVRKLRWRQPSNARATDSGGKIYMGTERPSLRTCKGTS 149
           FC+  +R + K++WR+P  A   +     Y+  E  +LRT  G S
Sbjct: 24  FCQPTQRTMSKIQWRKPKPAMVEEKTQLRYL-EELNALRTELGAS 67


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 23  IGNS*DLTSLRKLKRLSQIIKCF 91
           + N  D+T     K+ S++++CF
Sbjct: 100 VNNCKDITESNSCKKSSKLLQCF 122


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 100  SSFTYALTMSDAPGRPMKFPYTFSAKVAQF 189
            ++ TY  T  D PG P       S+  A F
Sbjct: 1202 TTVTYCQTEEDVPGSPADIKVVVSSPQALF 1231


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 100  SSFTYALTMSDAPGRPMKFPYTFSAKVAQF 189
            ++ TY  T  D PG P       S+  A F
Sbjct: 1198 TTVTYCQTEEDVPGSPADIKVVVSSPQALF 1227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,460
Number of Sequences: 438
Number of extensions: 3670
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)