Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I08
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0115 - 11248021-11248101,11249017-11249118 56 3e-08
05_03_0661 - 16726958-16726966,16727133-16727234 54 1e-07
07_03_1136 + 24218601-24218734,24218769-24219906 32 0.54
02_04_0400 - 22608519-22608844,22609044-22609122 32 0.54
10_08_0218 - 15967064-15967906 31 0.94
06_01_0178 + 1386981-1387505 31 1.2
06_03_0790 - 24636805-24637770 30 2.9
03_01_0023 + 198414-198968 30 2.9
12_02_1219 + 27096477-27096590,27096704-27097078 29 3.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.8
03_02_0765 + 11000724-11002496 29 3.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.0
07_03_1751 - 29215074-29216270 29 5.0
07_03_0558 + 19461369-19462448 29 5.0
06_03_0757 + 24267599-24268882 29 5.0
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 5.0
10_08_0217 - 15962192-15962884 29 6.6
07_03_0560 + 19479597-19480667 28 8.7
03_05_0690 + 26778567-26778804,26778950-26779024,26779995-267800... 28 8.7
>01_02_0115 - 11248021-11248101,11249017-11249118
Length = 60
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLXHGSKIFKESKVLQEG*PEASQATRE 270
MAKSKNHT HNQ+ KAH+NGIKKP++ R ST K + + ++ ++ +A E
Sbjct: 1 MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNQRYSRKHNKKSGEAESE 59
>05_03_0661 - 16726958-16726966,16727133-16727234
Length = 36
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEST 189
MAKSKNHT HNQ+ KAH+NGIKKP++ R ST
Sbjct: 1 MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTST 32
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 892 GGXXXRXXXPSGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG P GG G P GG G G GG R GGGG
Sbjct: 151 GGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGG 206
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Frame = -1
Query: 780 GXGGPKXXXAPXPXGGGGG------LXXSXKKGXRKXPPXXEXGXXRXVGXIXXXGXXXX 619
G GG P P GGGGG L G PP G G
Sbjct: 123 GAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGP 182
Query: 618 GXRPGXGXPXGGPKSA 571
G PG G GGP A
Sbjct: 183 GRAPGGGGGGGGPGRA 198
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -3
Query: 892 GGXXXRXXXPSGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG P GG G P GG GG G G GG R GGGG
Sbjct: 177 GGGGGPGRAPGGGGGGGGPGRAP-GGGGGGGGLGGGGGEGG--APERVIGGGGGGG 229
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 32.3 bits (70), Expect = 0.54
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -3
Query: 892 GGXXXRXXXPSGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRX 713
GG GG G GG GG G G GG GGGG
Sbjct: 35 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYY 94
Query: 712 PXKRXPQXPPEXG 674
P PP G
Sbjct: 95 PPWNGGYYPPGPG 107
>10_08_0218 - 15967064-15967906
Length = 280
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 862 SGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGG 728
SG G P GGA GG G G GG R + G G
Sbjct: 93 SGSGYGQAGGYGPHGGAYAQGGGQGGGGGGGVNGGSRYGSGSGSG 137
>06_01_0178 + 1386981-1387505
Length = 174
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -3
Query: 892 GGXXXRXXXPSGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG GG G +GGA GG G G GG K GG G
Sbjct: 37 GGGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAG 92
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -3
Query: 862 SGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
+GG G +GGA GG G G GG K GG G
Sbjct: 69 AGGGGGGGGGKGRKGGAGGHGGAGGGGGGGGGKGRKGGRGGDGGSG 114
>06_03_0790 - 24636805-24637770
Length = 321
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 859 GGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG G GG GG G G GG R GGGG
Sbjct: 86 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGG 130
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 862 SGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
SGG G GG GG G G GG GGGG
Sbjct: 81 SGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGG 126
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 859 GGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG G GG GG G G GG + GGGG
Sbjct: 90 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGG 134
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = -3
Query: 892 GGXXXRXXXPSGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGS 722
GG GG G GG GG G G GG GGGG+
Sbjct: 92 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGN 148
>03_01_0023 + 198414-198968
Length = 184
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 859 GGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGS 722
GG G GG + GG G G GG GGGGS
Sbjct: 46 GGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGGSGGGGGGGS 91
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -3
Query: 820 GGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRXP 710
GG + GG G GG GGGG R P
Sbjct: 65 GGGSGGGGSGGGGSGGGGSGGGGGGGSGGGGGGGRCP 101
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 835 GXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
G GG GG G G GG R GGGG
Sbjct: 96 GYGQRGGGGGYGGGGGYGGGGGGGYGQRREGGYGGGG 132
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPPPPXGXGAXXXFGPPXPXXP 790
PPPPP G F PP P P
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPP 569
>03_02_0765 + 11000724-11002496
Length = 590
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -3
Query: 859 GGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGS 722
GG G GG GG G G GG GGGG+
Sbjct: 187 GGGAGGGLGSGAGGGGGLGGGAGGGGGLGGGAGGGLGGGAGGGGGA 232
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 701 PFXXXSXRPPPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXP 835
P+ S +PPPPP + PP P P R L P
Sbjct: 98 PYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPP 142
>07_03_1751 - 29215074-29216270
Length = 398
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 892 GGXXXRXXXPSGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG G V G GG GG G G GG GGGG
Sbjct: 187 GGGGLGGGAGGGAGVGGGAGGGAGGGGGLGGGAGGGAGGGGGLGGGAGGGHGGGGG 242
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 859 GGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG G GGA GG G G GG GG G
Sbjct: 142 GGGAGGGAGAGVGGGAGAGGGAGGGGGLGGGAGGGAGGGLGGGSG 186
>07_03_0558 + 19461369-19462448
Length = 359
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 859 GGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG + G GGA GG G G GG GGGG
Sbjct: 106 GGGLGGGQGGGFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGG 150
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -3
Query: 862 SGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
+GG V G GG GG G G G GGGG
Sbjct: 165 AGGGVGGGGGFGGGGGGGLGGGHGGGFGGGAGVGGGAGGGVGGGGG 210
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -3
Query: 862 SGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
+GG V G GG GG G G G GGGG
Sbjct: 305 AGGGVGGGGGFGGGGGGGLGGGHGGGFGAGAGVGGGAGGGVGGGGG 350
>06_03_0757 + 24267599-24268882
Length = 427
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 835 GXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
G P GG GG G G GG GGGG
Sbjct: 238 GSCPPGGCISSGGGGGGSGSGGGARQTFPGGGTGGGG 274
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 859 GGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXR 716
GG G GG GG G G GG GGGG R
Sbjct: 68 GGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGGGGGGGRGGGGGGGGR 115
>10_08_0217 - 15962192-15962884
Length = 230
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 862 SGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGG 728
SG G P GGA GG G G GG + G G
Sbjct: 133 SGSGYGQAGGYGPHGGAYAQGGGQGGGGGGGYNGGSGYGSGSGSG 177
>07_03_0560 + 19479597-19480667
Length = 356
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 835 GXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
G EGG GG G G GG GGGG
Sbjct: 185 GGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGG 221
>03_05_0690 +
26778567-26778804,26778950-26779024,26779995-26780099,
26780869-26781000,26781432-26781571,26782213-26782323,
26782690-26782812,26784166-26784267,26784536-26784546,
26784878-26785103,26785363-26785401,26785413-26785583,
26785674-26785753,26785976-26786039
Length = 538
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 820 GGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG GG G G GG R GGGG
Sbjct: 13 GGGGGGGGGGGGGGGGGGVGGDRGGGGSGGGG 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,885,463
Number of Sequences: 37544
Number of extensions: 326393
Number of successful extensions: 1904
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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