Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I08
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29 pro... 58 3e-08
U49083-1|AAC50647.1| 159|Homo sapiens HIP protein. 58 3e-08
U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29 pro... 58 3e-08
BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29 p... 58 3e-08
BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29 p... 58 3e-08
BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29 p... 58 3e-08
BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29 p... 58 3e-08
BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29 p... 58 3e-08
AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA seq... 58 3e-08
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 4.3
AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII p... 31 4.3
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 31 5.6
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 31 5.6
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 31 5.6
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 31 5.6
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 31 5.6
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 31 5.6
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 31 5.6
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 31 5.6
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 7.5
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 7.5
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 7.5
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 7.5
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 31 7.5
>Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>U49083-1|AAC50647.1| 159|Homo sapiens HIP protein.
Length = 159
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29
protein.
Length = 161
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 35 VDPKFLRNMRFAKKHNKKGLKKM 57
>AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA
sequence from clone RP11-632C17 on chromosome 6 Contains
the gene for a novel protein similar to ribosomal
protein L29 ).
Length = 172
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 186
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 16 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 46
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 MDPKFLRNQRFCKKGNLKPAKQL 265
+DPKFLRN RF KK N K K++
Sbjct: 50 VDPKFLRNMRFAKKHNKKGLKKM 72
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/70 (28%), Positives = 24/70 (34%)
Frame = +2
Query: 581 GPPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXX 760
GP G PG P P + PF+ L P +PPPPP
Sbjct: 37 GPGAGLLAPGPPPPP--PVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPPPSPGA 94
Query: 761 XFGPPXPXXP 790
+ PP P P
Sbjct: 95 SYPPPQPPPP 104
>AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII
protein.
Length = 1125
Score = 31.5 bits (68), Expect = 4.3
Identities = 27/100 (27%), Positives = 30/100 (30%), Gaps = 1/100 (1%)
Frame = -1
Query: 876 GXPXXPGXPXXXPXGXXQRVXPRXXVXXXGXXGXGGPKXXXAPXPXGGGGGLXXSXKKGX 697
G P PG P G + G G GP P P G G +G
Sbjct: 510 GLPGQPGVP-----GEDGAAGKKGEAGLPGARGPEGPPGKGQPGPKGDEGKKGSKGNQGQ 564
Query: 696 RKXP-PXXEXGXXRXVGXIXXXGXXXXGXRPGXGXPXGGP 580
R P P G +G G G PG GGP
Sbjct: 565 RGLPGPEGPKGEPGIMGPFGMPGTSIPGP-PGPKGDRGGP 603
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 865 PSGGXVXXXXGXXPEGGAAXXGGXXGXXG-XGGXKXXXRXXAXXGGGG 725
P GG G GG GG G G GG + R GGGG
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGG 54
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 865 PSGGXVXXXXGXXPEGGAAXXGGXXGXXG-XGGXKXXXRXXAXXGGGG 725
P GG G GG GG G G GG + R GGGG
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGG 54
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 865 PSGGXVXXXXGXXPEGGAAXXGGXXGXXG-XGGXKXXXRXXAXXGGGG 725
P GG G GG GG G G GG + R GGGG
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGG 54
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 865 PSGGXVXXXXGXXPEGGAAXXGGXXGXXG-XGGXKXXXRXXAXXGGGG 725
P GG G GG GG G G GG + R GGGG
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGG 54
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 865 PSGGXVXXXXGXXPEGGAAXXGGXXGXXG-XGGXKXXXRXXAXXGGGG 725
P GG G GG GG G G GG + R GGGG
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGG 54
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 865 PSGGXVXXXXGXXPEGGAAXXGGXXGXXG-XGGXKXXXRXXAXXGGGG 725
P GG G GG GG G G GG + R GGGG
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGG 54
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 865 PSGGXVXXXXGXXPEGGAAXXGGXXGXXG-XGGXKXXXRXXAXXGGGG 725
P GG G GG GG G G GG + R GGGG
Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGG 54
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 865 PSGGXVXXXXGXXPEGGAAXXGGXXGXXG-XGGXKXXXRXXAXXGGGG 725
P GG G GG GG G G GG + R GGGG
Sbjct: 4 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGG 51
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 584 PPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXXX 763
PP P G P P I P P +G P PPPP G G
Sbjct: 1307 PPPPLPGAGIPPPPPLPGVGIPPPP---PLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPA 1363
Query: 764 FGPPXP 781
PP P
Sbjct: 1364 PAPPLP 1369
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 584 PPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXXX 763
PP P G P P I P P +G P PPPP G G
Sbjct: 1307 PPPPLPGAGIPPPPPLPGVGIPPPP---PLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPA 1363
Query: 764 FGPPXP 781
PP P
Sbjct: 1364 PAPPLP 1369
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 584 PPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXXX 763
PP P G P P I P P +G P PPPP G G
Sbjct: 1307 PPPPLPGAGIPPPPPLPGVGIPPPP---PLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPA 1363
Query: 764 FGPPXP 781
PP P
Sbjct: 1364 PAPPLP 1369
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 584 PPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXXX 763
PP P G P P I P P +G P PPPP G G
Sbjct: 1307 PPPPLPGAGIPPPPPLPGVGIPPPP---PLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPA 1363
Query: 764 FGPPXP 781
PP P
Sbjct: 1364 PAPPLP 1369
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 584 PPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXXX 763
PP P G P P I P P +G P PPPP G G
Sbjct: 774 PPPPLPGAGIPPPPPLPGVGIPPPP---PLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPA 830
Query: 764 FGPPXP 781
PP P
Sbjct: 831 PAPPLP 836
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,432,259
Number of Sequences: 237096
Number of extensions: 1774789
Number of successful extensions: 5304
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4962
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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