Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I08
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical... 47 2e-05
AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical ... 44 1e-04
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.84
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.84
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.84
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 1.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.6
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 3.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 3.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 7.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 7.8
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical
protein B0513.3 protein.
Length = 62
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1
Query: 94 MAKSKNHTNHNQNRKAHRNGIKKPRK 171
MAKSKNHTNHNQN+KAHRNGI KP+K
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKPKK 26
>AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical
protein Y47H9C.14 protein.
Length = 87
Score = 47.2 bits (107), Expect = 2e-05
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 100 KSKNHTNHNQNRKAHRNGIKKPRK 171
K +NHTNHN+N KAHRNGI KP+K
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKK 37
>AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical
protein Y37H9A.5 protein.
Length = 167
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 100 KSKNHTNHNQNRKAHRNGIKKPR 168
KSKNHTNHNQN AHR GI KP+
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKPK 102
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/70 (34%), Positives = 24/70 (34%)
Frame = +2
Query: 581 GPPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXX 760
GPP P G P P P L P S GG P PPPPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPP-PPPGGLPPIS--GGPPPPP-PPPGGCPPPPPPPPPGGF 780
Query: 761 XFGPPXPXXP 790
GPP P P
Sbjct: 781 KGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 728 PPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPXGXXXGXPGXXGXPVXXPP 892
PPPP G GPP P P G P G G P G P PP
Sbjct: 713 PPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/70 (34%), Positives = 24/70 (34%)
Frame = +2
Query: 581 GPPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXX 760
GPP P G P P P L P S GG P PPPPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPP-PPPGGLPPIS--GGPPPPP-PPPGGCPPPPPPPPPGGF 780
Query: 761 XFGPPXPXXP 790
GPP P P
Sbjct: 781 KGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 728 PPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPXGXXXGXPGXXGXPVXXPP 892
PPPP G GPP P P G P G G P G P PP
Sbjct: 713 PPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/70 (34%), Positives = 24/70 (34%)
Frame = +2
Query: 581 GPPXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXX 760
GPP P G P P P L P S GG P PPPPP
Sbjct: 308 GPPPPPPPGGLPPITGGPPPP-PPPGGLPPIS--GGPPPPP-PPPGGCPPPPPPPPPGGF 363
Query: 761 XFGPPXPXXP 790
GPP P P
Sbjct: 364 KGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 728 PPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPXGXXXGXPGXXGXPVXXPP 892
PPPP G GPP P P G P G G P G P PP
Sbjct: 296 PPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPG---GLPPISGGPPPPPP 346
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -3
Query: 826 PEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRXPXKRXPQXPPEXGK 671
P GG GG G G GG GGG R P P + G+
Sbjct: 188 PGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGRRRPYDDYDSDPIKRGR 239
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -3
Query: 862 SGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRXPXKRXPQXPP 683
+GG GGA GG G G GG GGGG PQ P
Sbjct: 338 TGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAP 397
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 725 PPPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPXGXXXGXPGXXGXP 877
PP PP GA GPP P P G G G PG G P
Sbjct: 228 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSG-PPGPPGPAGTP 277
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 826 PEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRXPXKRXPQXPP 683
P GG GG G G GG + R + GGGG R R + PP
Sbjct: 73 PRGG----GGDRGGFGGGG-RGGARVSSYSGGGGGGRDRFDRYDRGPP 115
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 826 PEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRXPXKRXPQXPP 683
P GG GG G G GG + R + GGGG R R + PP
Sbjct: 73 PRGG----GGDRGGFGGGG-RGGARVSSYSGGGGGGRDRFDRYDRGPP 115
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 826 PEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRXPXKRXPQXPP 683
P GG GG G G GG + R + GGGG R R + PP
Sbjct: 73 PRGG----GGDRGGFGGGG-RGGARVSSYSGGGGGGRDRFDRYDRGPP 115
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 725 PPPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPXGXXXGXPGXXGXP 877
PP PP GA GPP P P G G G PG G P
Sbjct: 223 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSG-PPGPPGPAGTP 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 725 PPPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPXGXXXGXPGXXGXP 877
PP PP GA GPP P P G G G PG G P
Sbjct: 223 PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSG-PPGPPGPAGTP 272
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/68 (29%), Positives = 23/68 (33%)
Frame = +2
Query: 587 PXGXPXPGRXPXXXFPXKXIXPTXRLXPFSXLGGXLRXPFXXXSXRPPPPPXGXGAXXXF 766
P G P P P + P +GG P + PPPPP G G
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQ- 128
Query: 767 GPPXPXXP 790
PP P P
Sbjct: 129 -PPRPKTP 135
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 728 PPPPXGXGAXXXFGPP 775
PPPP G GA +GPP
Sbjct: 411 PPPPGGPGAPGSYGPP 426
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 862 SGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
SGG G GG GG G G GG GGGG
Sbjct: 85 SGGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGG 130
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 725 PPPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPXGXXXGXPGXXGXP 877
P PP G GPP P P G P G G PG G P
Sbjct: 145 PAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPG-PGGKPGPAGPP 194
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -3
Query: 835 GXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRXPXKRXPQXPP 683
G GG + GG G GG A GGG P P PP
Sbjct: 257 GGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -3
Query: 835 GXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGGSXRXPXKRXPQXPP 683
G GG + GG G GG A GGG P P PP
Sbjct: 257 GGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -3
Query: 892 GGXXXRXXXPSGGXVXXXXGXXPEGGAAXXGGXXGXXGXGGXKXXXRXXAXXGGGG 725
GG GG G GG GG G G GG GGGG
Sbjct: 127 GGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGG 182
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Frame = +2
Query: 728 PPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPX----GXXXGXPGXXGXPVXXPP 892
PPPP PP P +W P G G PG G P PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPPPPXGXGAXXXFGPPXPXXP 790
PPPPP G A PP P P
Sbjct: 634 PPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 725 PPPPPXGXGAXXXFGPPXPXXP 790
PPPPP G A PP P P
Sbjct: 460 PPPPPMGLPAVGAGAPPPPPPP 481
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Frame = +2
Query: 728 PPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPX----GXXXGXPGXXGXPVXXPP 892
PPPP PP P +W P G G PG G P PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 725 PPPPPXGXGAXXXFGPPXPXXPXXXTXXRGXTLWXXPXGXXXGXPGXXGXP 877
P PP G GPP P P G P G G PG G P
Sbjct: 147 PAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPG-PGGKPGPAGPP 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,285,428
Number of Sequences: 27780
Number of extensions: 238703
Number of successful extensions: 1136
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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