Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I05
         (864 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   1.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   1.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   7.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   7.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   7.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.4  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 665 LPEVMLGLLPGGGGTQRLPALTSIPTTLDLAL 760
           L E  +G + G GGT  +   TS+ T++ LA+
Sbjct: 282 LLEPAVGTMTGAGGTAIVSISTSVSTSVYLAI 313


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 708  VPPPPGKSPNMTSGSPNPVLESF 640
            VPPP G S   ++GS +P +  F
Sbjct: 1111 VPPPSGSSGPGSTGSKSPPVAGF 1133


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -1

Query: 780 LSQFYPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYL 622
           L QF P    S V       G+L    P G +PN +S SP P     +  ++L
Sbjct: 35  LGQFSPQGPNSPVSFSMGGHGSLL--SPSGNTPNKSSTSPYPPNHPLSGSKHL 85


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 267 LGLLERHTFGY 235
           LG++ RH FGY
Sbjct: 7   LGIMHRHCFGY 17


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -2

Query: 62  DWSSQVSKS 36
           DWSSQVSK+
Sbjct: 334 DWSSQVSKA 342


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 351 QVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGG*YKH 470
           Q+ EEV+NI    +  + +     ++ +P   I  G Y H
Sbjct: 259 QISEEVANIWGLKKVYAPVVDGEFLTDEPIAIIKSGDYNH 298


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 351 QVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGG*YKH 470
           Q+ EEV+NI    +  + +     ++ +P   I  G Y H
Sbjct: 261 QISEEVANIWGLKKVYAPVVDGEFLTDEPIAIIKSGDYNH 300


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 708 VPPPPGKSPNMTSGSPNPVL 649
           +PP PG SP+    S +P +
Sbjct: 230 IPPHPGLSPHPPHLSSHPAI 249


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 708 VPPPPGKSPNMTSGSPNPVL 649
           +PP PG SP+    S +P +
Sbjct: 122 IPPHPGLSPHPPHLSSHPAI 141


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 286 NLHFVCTWLAGTAYFRLCT 230
           +L F C ++  T +F LCT
Sbjct: 82  HLLFYCPFIIFTVHFLLCT 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,856
Number of Sequences: 336
Number of extensions: 4264
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)