Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I05
(864 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 51 1e-06
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 50 2e-06
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 47 2e-05
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 45 7e-05
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 45 7e-05
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 42 6e-04
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 33 0.29
12_02_1192 - 26884474-26885266,26885430-26885895,26886333-26886561 32 0.68
05_04_0393 - 20895485-20895645,20895750-20896358,20896541-208966... 31 0.90
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 30 2.1
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127... 29 4.8
03_02_0928 + 12464325-12464498,12466494-12466679,12466929-124670... 29 4.8
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 29 6.3
02_05_0679 + 30817768-30818001 29 6.3
10_08_0361 + 17207657-17207701,17208850-17209773 28 8.4
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 608 LLLACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLAL 760
L++ C R++ ++ GLPE+ LG++PG GGTQRLP L +P L++ L
Sbjct: 119 LVMVCHARVSTSSAQ--LGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLL 167
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 532 FRRIEQSRKPYIAAIQGSCLGGGLETAL 615
F + + KP +AAI G LGGGLE +
Sbjct: 94 FMLLPDAPKPSVAAIDGVALGGGLELVM 121
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 608 LLLACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLAL 760
L + C RI+ +++ GLPE+ LG++PG GGTQRLP L +P +++ L
Sbjct: 117 LTMGCHARISTPEAQ--LGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMML 165
Score = 35.9 bits (79), Expect = 0.042
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +1
Query: 541 IEQSRKPYIAAIQGSCLGGGLETALG 618
+E +KP +AAIQG LGGGLE +G
Sbjct: 95 MEAGKKPSVAAIQGLALGGGLELTMG 120
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +2
Query: 614 LACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLAL 760
+AC RI+ ++ GLPE+ LG++PG GGTQRLP L + L++ L
Sbjct: 124 MACHARISTPTAQ--LGLPELQLGVIPGFGGTQRLPRLVGLTKALEMML 170
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 541 IEQSRKPYIAAIQGSCLGGGLETAL 615
+E + KP +AAI G LGGGLE A+
Sbjct: 100 LEAATKPSVAAIDGLALGGGLEVAM 124
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 45.2 bits (102), Expect = 7e-05
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 614 LACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLAL 760
+ C+ RI++ ++ GLPE+ LG++P GGTQRLP L + L++ L
Sbjct: 120 MVCQARISIPTAQ--LGLPELQLGVIPAFGGTQRLPRLVGLTKALEMML 166
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +1
Query: 391 KQILVLKLQSLYQASLDASLQGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIA 570
K I+V ++ LD + GA I + + K + VS+ + +E + KP +A
Sbjct: 51 KAIVVTGKGGVFSGGLDINTFGA-IQRNKAEQLKVDYVSIDV----MTNTLEAAGKPSVA 105
Query: 571 AIQGSCLGGGLETAL 615
AI G LGGGLE ++
Sbjct: 106 AINGPALGGGLEISM 120
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +2
Query: 608 LLLACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTG*NCES 781
L L+C RI +++ GLPE L ++PG GGTQRLP + ++ TG C +
Sbjct: 123 LALSCDLRICGENAT--LGLPETGLAIIPGAGGTQRLPRIVGRSRAKEMIFTGRRCNA 178
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 559 PYIAAIQGSCLGGGLETALGM*ISHCCE 642
P IA I+G+ LGGGLE AL + C E
Sbjct: 107 PTIAVIEGAALGGGLELALSCDLRICGE 134
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 249 AVPASQVHTKCKLV-NGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVII 425
A A++ K ++ NGV V+TLD P +N++N ++ ++E ETN ++ ++
Sbjct: 2 AAAAAEEFVKGRVTPNGVAVITLDRPKA-LNAMNLEMDLRYKAFLDEWETNPSVKCVLVE 60
Query: 426 SGKPGCFIAGG 458
S P F AGG
Sbjct: 61 SSSPRAFSAGG 71
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 454 GADIS---MIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLETALGM* 624
GAD+ ++ C+ +E V SL F E P IA ++G+ GGGLE AL
Sbjct: 105 GADLKERRLMSPCEVREFVNSL----RSTFLSFEALSIPTIAIVEGAAFGGGLELALSCD 160
Query: 625 ISHCCE 642
+ C E
Sbjct: 161 LRICGE 166
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Frame = +2
Query: 608 LLLACKYRIAVKDSKTGFGLPEVMLGLLPG---------GGGTQRLPALTSIPTTLDLAL 760
L L+C RI +++ F LPE L ++PG GGTQRLP + +L
Sbjct: 155 LALSCDLRICGENAT--FSLPETGLAIIPGYVFKMALYFSGGTQRLPRIVGKSRAKELIF 212
Query: 761 TG 766
TG
Sbjct: 213 TG 214
>12_02_1192 - 26884474-26885266,26885430-26885895,26886333-26886561
Length = 495
Score = 31.9 bits (69), Expect = 0.68
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +3
Query: 318 SPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGG*YKHDRKLQNKGR 497
SP+ + +L +V ++ + VNE N E A++ KP +GG YK +KL+ +G+
Sbjct: 195 SPSKQCIALQAEVEDKGKSKVNEANDNLEEEIALLARSKPSKKKSGG-YKLMKKLKKEGK 253
Query: 498 SCQS 509
++
Sbjct: 254 KIEA 257
>05_04_0393 -
20895485-20895645,20895750-20896358,20896541-20896616,
20896729-20896920,20897118-20897438,20897880-20898119,
20898205-20898522,20898621-20898678,20898778-20898936,
20900090-20900308,20900400-20900614
Length = 855
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -3
Query: 469 CLYQPPAMKHPGLPDIMTAASIPEFVSISFTMLLTSSITWVLSEF-TLTFGESKV-TT*T 296
CLY A ++P A IP+F S + TSS+ W ++ T+ +G+ T
Sbjct: 228 CLYYLIADRYPHREKTWIGAVIPDFQEASLWIRYTSSVYWSITTMTTVGYGDMHAQNTVE 287
Query: 295 PLTNLHFVCTWLAGTAY 245
+ N+ ++ L TAY
Sbjct: 288 MIFNIFYMLFNLGLTAY 304
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 37 DLLTCELQSSNESLGSKSETKLFNK 111
DL+TC L +N+S +S+T+L NK
Sbjct: 3252 DLMTCLLGKANDSTAKQSDTELLNK 3276
>12_01_1041 -
10711362-10711428,10711571-10712262,10712622-10712777,
10712885-10713957,10714422-10714524,10714694-10714876,
10715007-10715099,10715379-10715564,10716530-10716793
Length = 938
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 518 LLDRLTTSSFVLQFSIMLISAPCNEASRLA*YNDCSFNTRICFYFIYYVTNFFH 357
L DR + + + SIMLI A C SR+ + +T + Y+ N FH
Sbjct: 181 LADRKVGKNHLFKRSIMLIKAWCYHESRILGAHHGLLSTYALETLVLYIFNIFH 234
>03_02_0928 +
12464325-12464498,12466494-12466679,12466929-12467021,
12467212-12467394,12467506-12467608,12467695-12467865,
12468086-12469084,12469178-12469254,12469485-12470337,
12470878-12471000,12471526-12471878
Length = 1104
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -2
Query: 518 LLDRLTTSSFVLQFSIMLISAPCNEASRLA*YNDCSFNTRICFYFIYYVTNFFH 357
L+DR + +++ SI+LI A C SRL + +T I Y+ N FH
Sbjct: 151 LVDRKVGKNHLVKNSIILIKAWCYYESRLLGAHHGLISTYALETLILYIFNLFH 204
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 672 KSCWDFCPAVEGHRDYLLSPPY 737
K+ WDF PAV G R + PP+
Sbjct: 314 KNLWDFVPAVPGDRFLSMLPPW 335
>02_05_0679 + 30817768-30818001
Length = 77
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 723 AGNLCVPPPPGKSPNMTSGSPNPVLE 646
+GN+ +PPPP SP+ T G P LE
Sbjct: 37 SGNIALPPPP--SPHWTGGHRLPPLE 60
>10_08_0361 + 17207657-17207701,17208850-17209773
Length = 322
Score = 28.3 bits (60), Expect = 8.4
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +3
Query: 180 LSALK-ILRSRKELFISGVHSR---KYAVPASQVHTKCKL-VNGVYVVTLDSPNV-KVNS 341
LSA++ I +S++E+F +G+H + K A ++ L V +++ P+V K
Sbjct: 41 LSAIEGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDLYVTDAIQISVRIPSVGKTTK 100
Query: 342 LNTQVMEEVSNIVNEIETNSGI 407
LN + +++I EIE GI
Sbjct: 101 LNMRKSNSIADIKAEIEQEEGI 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,352,802
Number of Sequences: 37544
Number of extensions: 466241
Number of successful extensions: 1761
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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