Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I05
(864 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 50 2e-06
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 49 3e-06
At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t... 44 1e-04
At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr... 42 5e-04
At4g36420.1 68417.m05174 ribosomal protein L12 family protein 31 0.99
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 29 3.0
At1g10050.1 68414.m01133 glycosyl hydrolase family 10 protein / ... 29 5.3
At5g41180.1 68418.m05005 leucine-rich repeat protein kinase, put... 28 7.0
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 28 7.0
At2g05250.1 68415.m00553 DNAJ heat shock N-terminal domain-conta... 28 7.0
At2g05230.1 68415.m00551 DNAJ heat shock N-terminal domain-conta... 28 7.0
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 7.0
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 28 9.2
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 28 9.2
>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
identical to fatty acid multifunctional protein (AtMFP2)
GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
acid beta-oxidation); contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 725
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +2
Query: 608 LLLACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALT 763
L +AC RI+ ++ GLPE+ LG++PG GGTQRLP L + L++ LT
Sbjct: 120 LAMACHARISAPAAQ--LGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILT 169
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 541 IEQSRKPYIAAIQGSCLGGGLETAL 615
+E +RKP +AAI G LGGGLE A+
Sbjct: 98 LEAARKPSVAAIDGLALGGGLELAM 122
>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
acid multifunctional protein (AIM1) identical to
gi:4337025; contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 721
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +2
Query: 608 LLLACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLAL 760
L +AC R+A K GLPE+ LG++PG GGTQRLP L + D+ L
Sbjct: 117 LAMACHARVAAP--KAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMIL 165
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 541 IEQSRKPYIAAIQGSCLGGGLETAL 615
+E SRKP +AA++G LGGGLE A+
Sbjct: 95 MEDSRKPVVAAVEGLALGGGLELAM 119
>At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to
AU-binding protein/Enoyl-CoA hydratase [Homo sapiens]
GI:780241, [Mus musculus]GI:6840920; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 229
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +2
Query: 608 LLLACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTG 766
+ LAC RI +++ FGLPE L ++PG GGTQRL L + +L TG
Sbjct: 84 MALACDLRICGENAV--FGLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTG 134
Score = 35.1 bits (77), Expect = 0.061
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 529 IFRRIEQSRKPYIAAIQGSCLGGGLETALGM*ISHCCE 642
+F IE P IAAI+G+ LGGGLE AL + C E
Sbjct: 58 MFSFIEALSIPTIAAIEGAALGGGLEMALACDLRICGE 95
>At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family
protein similar to Delta 3,5-delta2,4-dienoyl-CoA
isomerase, mitochondrial (ECH1) from Rattus norvegicus
[SP|Q62651], from Homo sapiens [SP|Q13011]; contains
Pfam profile PF00378 enoyl-CoA hydratase/isomerase
family protein
Length = 278
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +1
Query: 541 IEQSRKPYIAAIQGSCLGGGLETALGM*ISHCCE 642
IEQ RKP IAAI G+C+GGG++ I +C E
Sbjct: 110 IEQCRKPVIAAIHGACIGGGVDLITACDIRYCSE 143
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +2
Query: 608 LLLACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTG*NCES** 787
L+ AC R +D+ F + EV L ++ G QRLP++ ++LALT
Sbjct: 132 LITACDIRYCSEDAF--FSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSE 189
Query: 788 SKEIG 802
+K++G
Sbjct: 190 AKDLG 194
>At4g36420.1 68417.m05174 ribosomal protein L12 family protein
Length = 179
Score = 31.1 bits (67), Expect = 0.99
Identities = 27/103 (26%), Positives = 51/103 (49%)
Frame = +3
Query: 171 SKILSALKILRSRKELFISGVHSRKYAVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNT 350
S++L + + S +LF + SR Y+ PA+Q K+VN + +TL ++ L T
Sbjct: 12 SRVLKSTETRSSSVQLFT--IQSRSYSSPATQSENVSKIVNELSNLTL----LETMDL-T 64
Query: 351 QVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGG*YKHDRK 479
+++ + NI +E+ + + + + G AGG K +K
Sbjct: 65 EILRQKLNI-SELPVMAAMMPGMSLPGSGASKSAGGEGKEKKK 106
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 668 PEVMLGLLPGGGGTQRLPALTSIP 739
PEV +G+ GGGG Q LPA T +P
Sbjct: 229 PEVRIGVAFGGGGGQSLPA-TELP 251
>At1g10050.1 68414.m01133 glycosyl hydrolase family 10 protein /
carbohydrate-binding domain-containing protein similar
to GB:AAD27896 to endoxylanases gi|1255238
(Thermoanaerobacterium thermosulfurigenes), gi|1813595
(Hordeum vulgare) and others ; contains Pfam profiles
PF00331: Glycosyl hydrolase family 10, PF02018:
Carbohydrate binding domain
Length = 1063
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 469 MIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLE 606
MIE C E ++ RGH IF +E + +P++ + GS L +E
Sbjct: 777 MIEFC----ERYNIKTRGHCIFWEVESAIQPWVQQLTGSKLEAAVE 818
>At5g41180.1 68418.m05005 leucine-rich repeat protein kinase,
putative contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 664
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 493 PLFCSFRSCLYQPPAMKHPGLPDIMTAASIPE 398
P +C R CL + K+ G PD+M + PE
Sbjct: 553 PSYCQDRGCLVEWVREKNLGAPDVMASLVDPE 584
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 705 PPPPGKSPNMTSGSPNPVLESF 640
PPPP +SPN S SP P+ S+
Sbjct: 140 PPPPPRSPN--SASPPPISSSY 159
>At2g05250.1 68415.m00553 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 706
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +3
Query: 555 ETVYCRNTRQLSRRWIRDCSWHVNIALL*KTPKQDL-----DYQKSCWDFCPA 698
+TVY R+TR+ S++WI C + + P L + ++CWD PA
Sbjct: 643 KTVYHRSTREDSKKWIPRCEM---LRFSHQVPSWFLKDATSGFPENCWDLDPA 692
>At2g05230.1 68415.m00551 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 706
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +3
Query: 555 ETVYCRNTRQLSRRWIRDCSWHVNIALL*KTPKQDL-----DYQKSCWDFCPA 698
+TVY R+TR+ S++WI C + + P L + ++CWD PA
Sbjct: 643 KTVYHRSTREDSKKWIPRCEM---LRFSHQVPSWFLKDATSGFPENCWDLDPA 692
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 786 YQLSQFYPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNPVLE 646
YQ PV+A + V + VP P +S S +P P+LE
Sbjct: 711 YQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILE 757
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 383 IYYVTNFFHH-LGVK*VYFNIWRVQSDYVNSIDQL 282
+Y+ +F+ H LGVK Y +I V DY ++ L
Sbjct: 3404 VYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL 3438
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 383 IYYVTNFFHH-LGVK*VYFNIWRVQSDYVNSIDQL 282
+Y+ +F+ H LGVK Y +I V DY ++ L
Sbjct: 3637 VYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL 3671
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,083,942
Number of Sequences: 28952
Number of extensions: 377158
Number of successful extensions: 1291
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -