Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_I04
         (871 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96)           29   3.7  

>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2672

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 156  ARRHRNLSVHAYKECSGITTALEYILNCDSFAARDR 49
            A+R RNLS  A KEC  +   L  + N  S A +++
Sbjct: 1748 AQRRRNLSFEADKECEMLKEELHQLKNAQSMAEQEK 1783


>SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96)
          Length = 725

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 159 TQRSIRSPANFQSQSDTLAIFTTLSLGTRKWGEGRSSGLWERATXDFLVKVV 314
           T+ +  +PA       ++   TTL+L      + RSSG +  A+  FL K+V
Sbjct: 434 TRSATYAPAIMSGCGTSIMFVTTLALAAELVDQDRSSGAFVMASMSFLSKIV 485


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,812,298
Number of Sequences: 59808
Number of extensions: 445470
Number of successful extensions: 812
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)