Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I02
(839 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 241 6e-64
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 231 7e-61
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 139 3e-33
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 126 2e-29
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 107 8e-24
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 106 3e-23
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 87 2e-21
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 76 1e-17
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 75 2e-17
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 81 1e-15
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 79 4e-15
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 75 7e-14
10_07_0162 - 13713504-13714754,13716445-13716522 29 3.5
03_02_0147 - 5923117-5923215,5923882-5924069,5924885-5924977,592... 29 3.5
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 29 6.1
04_04_1659 - 35127145-35127204,35127324-35127464,35127597-351276... 29 6.1
11_06_0211 + 21305535-21305895,21306512-21306761,21307543-213076... 28 8.1
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 28 8.1
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 28 8.1
06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681 28 8.1
05_07_0306 - 29108860-29109282,29109425-29110441 28 8.1
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 241 bits (589), Expect = 6e-64
Identities = 111/212 (52%), Positives = 152/212 (71%), Gaps = 1/212 (0%)
Frame = +1
Query: 160 RAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSD 339
R +L+GPPGSGKGTQ+P +K++YC+CHL+TGDMLRA V++ + LG + K+ MD+G+LVSD
Sbjct: 32 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 91
Query: 340 EMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLV 519
++VV +ID+ + +P C+ GF+LDGFP TV QA+KLD++L K+ T +D V+ F I+DS+L
Sbjct: 92 DLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSILE 151
Query: 520 RRITGRLIHPPXGRXYHEXFHPPXKPMTDDVTGEALIKRSDDNVEALXKRLXTYHAQTVP 699
RITGR IHP GR YH F PP P DDVTGE LI+R DD E L RL +H QT P
Sbjct: 152 ERITGRWIHPSSGRSYHTKFAPPKVPGVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTEP 211
Query: 700 LXXYYMKERSTLGASMH-XKPXDDVFNKIDNI 792
+ YY K+ L A++H KP +V ++ +
Sbjct: 212 VIDYYSKK--ALVANLHAEKPPKEVTAEVQKV 241
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 231 bits (564), Expect = 7e-61
Identities = 106/205 (51%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Frame = +1
Query: 160 RAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSD 339
R +L+GPPG GKGTQ+P +K+++C+CHL+TGDMLRA V++ + LG + K+ MD+G+LVSD
Sbjct: 30 RVILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSD 89
Query: 340 EMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLV 519
++VV +ID+ + + C+ GF+LDGFP TV QA+KLD++LAK+ T +D V+ F I+D++L
Sbjct: 90 DLVVGIIDEAMKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILE 149
Query: 520 RRITGRLIHPPXGRXYHEXFHPPXKPMTDDVTGEALIKRSDDNVEALXKRLXTYHAQTVP 699
RITGR IHP GR YH F PP P DDVTGE LI+R DD L RL +H QT P
Sbjct: 150 ERITGRWIHPSSGRSYHTKFAPPKTPGLDDVTGEPLIQRKDDTAAVLKSRLEAFHVQTKP 209
Query: 700 LXXYYMKERSTLGASMH-XKPXDDV 771
+ YY K+ + A++H KP +V
Sbjct: 210 VIDYYTKK--GIVANLHAEKPPKEV 232
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 139 bits (336), Expect = 3e-33
Identities = 83/227 (36%), Positives = 124/227 (54%), Gaps = 1/227 (0%)
Frame = +1
Query: 109 PAAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSD 288
P AA + DPL + ++ G P SGKGTQ +K KY + H+S GD+LRAE+++GS+
Sbjct: 60 PRAAKVVVAVKADPL--KVMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSE 117
Query: 289 LGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPEC-KNGFLLDGFPXTVPQAEKLDDLLAKR 465
G+R K+ M++G+LV DE+VV+M+ + L QP+ + G+LLDG+P + QA L+ L +
Sbjct: 118 NGKRAKEFMEKGQLVPDEIVVNMVKERLLQPDAQEKGWLLDGYPRSYSQAMALETLNIRP 177
Query: 466 KTALDAVIEFGIEDSLLVRRITGRLIHPPXGRXYHEXFHPPXKPMTDDVTGEALIKRSDD 645
D I + D LLV R+ GR + P G+ YH + PP ++ L +R DD
Sbjct: 178 ----DIFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPP----ENEEIASRLTQRFDD 229
Query: 646 NVEALXKRLXTYHAQTVPLXXYYMKERSTLGASMHXKPXDDVFNKID 786
E + RL T++ L Y + DDVF +ID
Sbjct: 230 TEEKVKLRLQTHYQNVESLLSIY---EDVIVEVKGDALVDDVFAEID 273
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 126 bits (305), Expect = 2e-29
Identities = 81/237 (34%), Positives = 122/237 (51%), Gaps = 22/237 (9%)
Frame = +1
Query: 112 AAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDL 291
AAAA K P ++ ++ G P SGKGTQ + EKY + H+STGD+LRAEVSSG+++
Sbjct: 81 AAAARKEAP------LKVMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEI 134
Query: 292 GRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECK-NGFLLDGFPXTVPQAEKLDDLLAKRK 468
G++ K+ MD G LV D++V DM+ L QP+ + G+LLDG+P + QA+ L+ + +
Sbjct: 135 GKKAKEYMDNGMLVPDQVVTDMVVSRLSQPDVRERGWLLDGYPRSYAQAQSLESMKIRPD 194
Query: 469 TALDAVIEF---------------------GIEDSLLVRRITGRLIHPPXGRXYHEXFHP 585
+ IE + D +L+ R GR + P G+ YH P
Sbjct: 195 IFIVLEIELYNQFIKFLVHENITGYFNNVSTVPDDILIDRCVGRRLDPETGKIYHIKNFP 254
Query: 586 PXKPMTDDVTGEALIKRSDDNVEALXKRLXTYHAQTVPLXXYYMKERSTLGASMHXK 756
P D+V+ L+ RSDD E + RL TY + + Y + +G + K
Sbjct: 255 PE---NDEVSAR-LVTRSDDTFEKVKSRLDTYKQNSEAVIPTYSDLLNQVGGHLSLK 307
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 107 bits (258), Expect = 8e-24
Identities = 75/236 (31%), Positives = 123/236 (52%), Gaps = 13/236 (5%)
Frame = +1
Query: 112 AAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDL 291
AAA + + ++ V LG PG GKGT A RL V H++TGD++R E++S L
Sbjct: 46 AAAGRARQRVAEERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPL 105
Query: 292 GRRLKKVMDEGKLVSDEMVVDMIDKNLDQPE--CKNGFLLDGFPXTVPQAEKLDDLLAKR 465
+L +++++GKLVSDE++++++ K L + E ++GF+LDGFP TV QAE LD +
Sbjct: 106 SVQLAEIVNQGKLVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQAEILDGV---- 161
Query: 466 KTALDAVIEFGIEDSLLVRRITGRLIHPPXGRXYH--------EXFHPP--XKP-MTDDV 612
T +D V+ + + +LV + GR I G+ ++ E PP P + +
Sbjct: 162 -TDIDMVVNLKLREDVLVEKCLGRRICGQCGKNFNLACIDVKGENGLPPIYMAPLLPPNN 220
Query: 613 TGEALIKRSDDNVEALXKRLXTYHAQTVPLXXYYMKERSTLGASMHXKPXDDVFNK 780
LI R+DD E + RL Y+ + K + L S+ +P + + +
Sbjct: 221 CMSKLITRADDTEEVVRNRLQIYNDMVFNVVLGRYKSCTMLICSVGSQPVEGFYRQ 276
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 106 bits (254), Expect = 3e-23
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 15/218 (6%)
Frame = +1
Query: 106 APAAAATKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGS 285
A A + + +ED ++ V LG PG GKGT A RL + V H++TGD++R ++S
Sbjct: 37 AVARRGREREREEDGRRVQWVFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPG 96
Query: 286 DLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKN--GFLLDGFPXTVPQAEKLDDLLA 459
+L ++++ GKLVSDE++++++ K L++ K GF+LDGFP T+ QAE L+ +
Sbjct: 97 PFSEQLAEIVNNGKLVSDEIIINLLSKRLEEGAEKGELGFILDGFPRTIRQAEILEGV-- 154
Query: 460 KRKTALDAVIEFGIEDSLLVRRITGRLIHPPXGRXYH-------------EXFHPPXKPM 600
T +D VI + + L+ + GR + G ++ + PP P
Sbjct: 155 ---TDIDLVINLKLREEALLAKCLGRRMCSQCGGNFNVASIDMEGENGGPRMYMPPLLPP 211
Query: 601 TDDVTGEALIKRSDDNVEALXKRLXTYHAQTVPLXXYY 714
LI R DD E + +RL YH P+ +Y
Sbjct: 212 PQ--CESKLITRPDDTEEVVKERLRVYHDLCEPVEDFY 247
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 87.4 bits (207), Expect(2) = 2e-21
Identities = 46/125 (36%), Positives = 71/125 (56%)
Frame = +1
Query: 163 AVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDE 342
A +LG PGSGKGTQ R+ + HLS GD+LR+E+S+G + G + ++ EGK+V E
Sbjct: 45 AFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIKEGKIVPSE 104
Query: 343 MVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLVR 522
+ V++I K ++ + K L+DGFP + + T D VI F + +V+
Sbjct: 105 ITVELIRKAMESSDAKR-VLIDGFPRCEENRIAFERITG---TEPDLVIFFDCPEDEMVK 160
Query: 523 RITGR 537
R+ GR
Sbjct: 161 RLLGR 165
Score = 33.1 bits (72), Expect(2) = 2e-21
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 634 RSDDNVEALXKRLXTYHAQTVPLXXYYMKERSTLGASMHXKPXDDVFNKIDNIFXKXNFX 813
R DDN+E + KRL + + +P+ YY R + +++F + +F +
Sbjct: 169 RVDDNIETIKKRLKVFESLNIPVVDYY-TSRGKVHKINATGTEEEIFGAVHKLFSSLSCS 227
Query: 814 P 816
P
Sbjct: 228 P 228
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 75.8 bits (178), Expect(2) = 1e-17
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Frame = +1
Query: 109 PAAAATKLKPDEDPLGIRAV----LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVS 276
P K +E+ LG + V +LG PGSGKGTQ + E + HLS G++LRAE++
Sbjct: 4 PDVLTEKKDINENMLGGKKVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEIN 63
Query: 277 SGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLL 456
SGS+ G + ++ EGK+V E+ + ++ + + + + +++DGFP + ++
Sbjct: 64 SGSENGTMIDTIITEGKIVPSEITIKLLQEAIIKGG-NDKYIIDGFPRNEENRVVFESVI 122
Query: 457 AKRKTALDAVIEFGIEDSLLVRRITGR 537
+ + + V+ F + + RR+ GR
Sbjct: 123 S---ISPEFVLFFDCSEEEMERRLLGR 146
Score = 32.3 bits (70), Expect(2) = 1e-17
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 634 RSDDNVEALXKRLXTYHAQTVPLXXYY 714
RSDDN+E + KRL + ++P+ YY
Sbjct: 150 RSDDNIETIRKRLKVFVESSLPVIEYY 176
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 74.9 bits (176), Expect(2) = 2e-17
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Frame = +1
Query: 106 APAAAATKLKPDEDPLGIRAV----LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEV 273
AP A + + ++ LG + V +LG PGSGKGTQ + E + HLS GD+LRAE+
Sbjct: 7 APTVVAGQEEVTDNMLGDKKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEI 66
Query: 274 SSGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDL 453
SGS+ G ++ ++ EGK+V E MI D+ FL+DGFP +++
Sbjct: 67 KSGSENGTMIENMIKEGKIVPSEEA--MIKSGNDK------FLIDGFPRNEENRAAFENV 118
Query: 454 LAKRKTALDAVIEFGIEDSLLVRRITGR 537
K V+ F + + RR+ GR
Sbjct: 119 ---TKITPAFVLFFDCSEEEMERRLLGR 143
Score = 32.3 bits (70), Expect(2) = 2e-17
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 634 RSDDNVEALXKRLXTYHAQTVPLXXYYMKERSTLGASMHXKPXDDVFNKIDNIF 795
R DDN+E + KR + ++P+ YY + + KP +VF + IF
Sbjct: 147 RVDDNIETIRKRFKVFVESSLPVIEYY-NAKDKVKKIDAAKPIPEVFEDVKAIF 199
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 81.0 bits (191), Expect = 1e-15
Identities = 43/123 (34%), Positives = 70/123 (56%)
Frame = +1
Query: 169 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 348
+LG PGSGKGTQ + E + HLS GD+LRAE+ SGS+ G ++ ++ EGK+V E+
Sbjct: 29 VLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSEVT 88
Query: 349 VDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLVRRI 528
+ ++ + + E + FL+DGFP +++ K + V+ F + + RR+
Sbjct: 89 IKLLQDAMIKNE-NDKFLIDGFPRNEENRAAFENV---TKISPAFVLFFDCSEEEMERRL 144
Query: 529 TGR 537
GR
Sbjct: 145 LGR 147
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 79.0 bits (186), Expect = 4e-15
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Frame = +1
Query: 154 GIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLV 333
G + V++G PG K A RL E V ++S G ++R E+S S L +++ ++EGKLV
Sbjct: 70 GPQWVVMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKKIANSVNEGKLV 129
Query: 334 SDEMVVDMIDKNLDQPECK--NGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIED 507
++++ ++ K L++ K GF+LDG P T QAE LD+++ +D V+ F D
Sbjct: 130 PEDIIFGLLTKRLEEGYNKGETGFILDGIPRTHMQAEILDEIV-----DIDLVLNFKCAD 184
Query: 508 SLLVRRITGRLIHPPXGRXY 567
+ ++R G I P G+ +
Sbjct: 185 NCFMKRRFGGDICPHCGQLF 204
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 74.9 bits (176), Expect = 7e-14
Identities = 34/83 (40%), Positives = 56/83 (67%)
Frame = +1
Query: 169 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 348
++G PGSGKGTQ ++ +++ HLS GD+LR E ++ G +K +M+EGKLVS +++
Sbjct: 80 VIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNEGKLVSSDLI 139
Query: 349 VDMIDKNLDQPECKNGFLLDGFP 417
V ++ K + + + FL+DGFP
Sbjct: 140 VKLLFKAM-RESGNDKFLVDGFP 161
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 628 IKRSDDNVEALXKRLXTYHAQTVPLXXYYMKERSTLGASMHXKPXDDVFNKIDNIFXKXN 807
I R DDN++ + +R + QT+P+ YY K R L + D+VF + IF + N
Sbjct: 173 IGRDDDNIDTIRRRFDVFQQQTLPVIQYYEK-RGKLRKVDGNRQVDEVFEDVKAIFAQLN 231
Query: 808 FXPXHG 825
HG
Sbjct: 232 NQKIHG 237
>10_07_0162 - 13713504-13714754,13716445-13716522
Length = 442
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 178 PPGSGKGTQAPRLKEKYCVCHLSTG 252
PPG+G +AP ++ C C L TG
Sbjct: 15 PPGAGVRVRAPLVESVSCYCRLDTG 39
>03_02_0147 -
5923117-5923215,5923882-5924069,5924885-5924977,
5925499-5925628,5925720-5925802,5925893-5925976,
5926253-5926316,5926375-5926515,5926801-5926863,
5926968-5927006,5927126-5927185,5927567-5927624,
5927708-5928099
Length = 497
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 265 HAACHQWIGDKHNTFLSDEEPE 200
HA QWI +K+NTF+S + E
Sbjct: 448 HAEARQWIDEKYNTFISKLQVE 469
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 139 DEDPLGIRAVLLGPPGSGKGTQAPR 213
DE G R +GPPG+G G + PR
Sbjct: 166 DEPGYGYRPPPVGPPGAGYGNRLPR 190
>04_04_1659 -
35127145-35127204,35127324-35127464,35127597-35127647,
35127757-35127837,35128229-35128324,35128393-35128568,
35130088-35130176,35130255-35130362,35130673-35130809,
35131023-35131073,35131264-35131310,35131477-35131544,
35132161-35132262,35132556-35132735,35132821-35133059
Length = 541
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 346 VVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLLAK 462
V ++I ++D+P+ NGF LD F E+ D LL K
Sbjct: 182 VHEIIFSSIDKPKLLNGFCLDVFVVDGWDTEETDGLLQK 220
>11_06_0211 +
21305535-21305895,21306512-21306761,21307543-21307652,
21308836-21309067,21310233-21310603,21311434-21311507,
21311727-21311880,21312251-21312434,21313066-21313291,
21313704-21314135,21314399-21314456,21314748-21314829,
21315350-21315421,21316594-21316737,21317379-21317457,
21318023-21318105,21318198-21318252,21318488-21318778
Length = 1085
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 598 MTDDVTGEALIKRSDDNVEALXKRLXTYHAQTVPLXXYYMKERST 732
+ D V AL K + DNV A+ L ++++ V L +YM E ++
Sbjct: 381 LADYVVDLALEKGTTDNVAAVIVPLGSHYSSKVTLEDWYMLEENS 425
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 148 PLGIRAVLLGPPGSGKGTQAPRL-KEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEG 324
P GI +L GPPGSGK A + E L G + ++++ S+ L+K +E
Sbjct: 244 PKGI--LLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESE--SNLRKAFEEA 299
Query: 325 KLVSDEMV-VDMIDKNLDQPECKNG 396
+ + ++ +D ID + E NG
Sbjct: 300 EKNAPSIIFIDEIDSIAPKREKTNG 324
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 465 QDCTGRRNRVRNRGQSARK--ENYGQTDSPT 551
Q+CT RNR+R +K EN TD+PT
Sbjct: 1651 QECTEERNRIRVELDLVKKLLENMALTDNPT 1681
>06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681
Length = 350
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 145 DPLGIRAVLLGPP--GSGKGTQAPRLKEKYCVCHLST 249
+P + AV+L GSG G+ P E VCHL T
Sbjct: 263 NPTRVYAVVLESEEDGSGSGSGTPEKMEALAVCHLDT 299
>05_07_0306 - 29108860-29109282,29109425-29110441
Length = 479
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +1
Query: 166 VLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEM 345
+L GPPG+GK + + D+ EV S SDL R L + + LV +++
Sbjct: 254 LLYGPPGTGKSSLIAAMAN---YLKFDIYDLELTEVKSNSDLRRLLVGMSNRSILVVEDI 310
Query: 346 VVDMIDKNLDQPECK 390
+ + D+ E K
Sbjct: 311 DCTIDLQQRDEGEIK 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,675,394
Number of Sequences: 37544
Number of extensions: 441352
Number of successful extensions: 1257
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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