BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_I02
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 271 5e-73
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 97 1e-20
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 91 7e-19
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 91 7e-19
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 68 7e-12
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.1
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 29 4.1
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 29 4.1
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 29 4.1
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 5.4
Z68298-3|CAA92600.2| 357|Caenorhabditis elegans Hypothetical pr... 28 7.2
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 28 9.5
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 28 9.5
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 271 bits (664), Expect = 5e-73
Identities = 130/216 (60%), Positives = 153/216 (70%)
Frame = +1
Query: 154 GIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLV 333
GIRA+ +GPPGSGKGTQAP +KY CHL+TGD+LRAEV+SGS+ G+ LK MD GKLV
Sbjct: 26 GIRAIFIGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGKLV 85
Query: 334 SDEMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDSL 513
SDE+V +I++ L++PECK GF+LDGFP T QAEKLD++L +RKT LD V+EF I D L
Sbjct: 86 SDEVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDL 145
Query: 514 LVRRITGRLIHPPXGRXYHEXFHPPXKPMTDDVTGEALIKRSDDNVEALXKRLXTYHAQT 693
LVRRITGRL H GR YH F PP PM DD+TGE LI+RSDDN E L KRL YH T
Sbjct: 146 LVRRITGRLFHIASGRSYHLEFKPPKVPMKDDLTGEPLIRRSDDNEETLRKRLVQYHQMT 205
Query: 694 VPLXXYYMKERSTLGASMHXKPXDDVFNKIDNIFXK 801
VPL YY K + KP DV ID +F K
Sbjct: 206 VPLVDYYKKHGVHVAVDA-AKPMTDVKAHIDQVFAK 240
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 97.5 bits (232), Expect = 1e-20
Identities = 58/217 (26%), Positives = 110/217 (50%), Gaps = 3/217 (1%)
Frame = +1
Query: 160 RAVLLGPPGSGKGTQAPRLKEKYCVC---HLSTGDMLRAEVSSGSDLGRRLKKVMDEGKL 330
R +L G GSGKGT A L ++ + + GD +R ++ G++ G R + +++G+
Sbjct: 3 RVLLSGAAGSGKGTIARMLVREFEPLGFNYFAAGDFIRDHIARGTEFGVRAQSFLNKGEH 62
Query: 331 VSDEMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDS 510
V D ++ I + + + +LDG+P + Q + +++ + L+ ++E +
Sbjct: 63 VPDSILNGAILAEMLKAGPR--VVLDGYPRNMSQLKMVEE-----QAPLNLIVELKVPRK 115
Query: 511 LLVRRITGRLIHPPXGRXYHEXFHPPXKPMTDDVTGEALIKRSDDNVEALXKRLXTYHAQ 690
+L+ R++ +L+HP GR Y+ +PP + DD+TGE L KRS D +E +RL Y
Sbjct: 116 VLIDRLSKQLVHPASGRAYNLEVNPPKEEGKDDITGEPLFKRSTDQLEVARRRLEVYDKT 175
Query: 691 TVPLXXYYMKERSTLGASMHXKPXDDVFNKIDNIFXK 801
+ YY K+ + +M + VF + + +
Sbjct: 176 ENKVLDYYKKQNKCI--TMSGESSKAVFESVAEVMRR 210
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 91.5 bits (217), Expect = 7e-19
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 2/204 (0%)
Frame = +1
Query: 169 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 348
++G PGSGKGTQ ++ KY + HLS+GD+LR EV SGS G +L +M+ G LV E+V
Sbjct: 25 IVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALVPLEVV 84
Query: 349 VDMIDKNLDQ--PECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLVR 522
+D++ + + + + GFL+DG+P V Q ++ + + + K V+ F + + LV+
Sbjct: 85 LDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAK----LVLFFDVAEETLVK 140
Query: 523 RITGRLIHPPXGRXYHEXFHPPXKPMTDDVTGEALIKRSDDNVEALXKRLXTYHAQTVPL 702
R+ R +G A DDN + + KRL T+ T P+
Sbjct: 141 RLLHRA----------------------QTSGRA-----DDNADTIKKRLHTFVTSTAPV 173
Query: 703 XXYYMKERSTLGASMHXKPXDDVF 774
YY + + + DD+F
Sbjct: 174 VDYYESKGKLVRINAEGS-VDDIF 196
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 91.5 bits (217), Expect = 7e-19
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 2/204 (0%)
Frame = +1
Query: 169 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV 348
++G PGSGKGTQ ++ KY + HLS+GD+LR EV SGS G +L +M+ G LV E+V
Sbjct: 25 IVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALVPLEVV 84
Query: 349 VDMIDKNLDQ--PECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLVR 522
+D++ + + + + GFL+DG+P V Q ++ + + + K V+ F + + LV+
Sbjct: 85 LDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAK----LVLFFDVAEETLVK 140
Query: 523 RITGRLIHPPXGRXYHEXFHPPXKPMTDDVTGEALIKRSDDNVEALXKRLXTYHAQTVPL 702
R+ R +G A DDN + + KRL T+ T P+
Sbjct: 141 RLLHRA----------------------QTSGRA-----DDNADTIKKRLHTFVTSTAPV 173
Query: 703 XXYYMKERSTLGASMHXKPXDDVF 774
YY + + + DD+F
Sbjct: 174 VDYYESKGKLVRINAEGS-VDDIF 196
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 70.9 bits (166), Expect = 1e-12
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Frame = +1
Query: 169 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAE-VSSGSDLGRRLKKVMDEGKLVSDEM 345
+LGPPGSGKGT +++E HLS GD+LRAE GS+ G ++ + G +V E+
Sbjct: 7 VLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVPVEI 66
Query: 346 VVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLLVRR 525
+++ + GFL+DGFP + + + + A+++F + S V
Sbjct: 67 TCSLLENAMKACGDAKGFLVDGFPRNEDNLQGWNKQMDGK-----ALVQFVLFLSCPVSI 121
Query: 526 ITGRLIHPPXGRXYHEXFHPPXKPMTDDVTGEALIKRSDDNVEALXKRLXTYHAQTVPLX 705
R ++ GR TDD N E+L KR+ TY+ QT P+
Sbjct: 122 CIERCLNRGQGR-------------TDD------------NEESLKKRVETYNQQTFPII 156
Query: 706 XYYMKERSTLGASMHXKPXDDVFNKIDNIFXKXN 807
++ K + +P D V+ ++ +F N
Sbjct: 157 EHFEKS-GLVREVKSERPVDVVYADVEKVFDAAN 189
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 68.1 bits (159), Expect = 7e-12
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 169 LLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAE-VSSGSDLGRRLKKVMDEGKLVSDEM 345
+LGPPGSGKGT ++ E HLS GD+LRAE +GS+ G ++ + G +V E+
Sbjct: 7 VLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVPVEI 66
Query: 346 VVDMIDKNLDQPECKNGFLLDGFP 417
+++ + + NGFL+DGFP
Sbjct: 67 TCALLENAMIASKDANGFLIDGFP 90
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 634 RSDDNVEALXKRLXTYHAQTVPLXXYYMKERSTLGASMHXKPXDDVFNKIDNIFXKXN 807
R+DDNVE+L KR+ TY+ T P+ ++ K + +P +V+ + +F N
Sbjct: 133 RTDDNVESLKKRVETYNQSTFPIIEHFEKVGMVREVNSE-RPVTEVYEDVVKVFAAAN 189
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 44.4 bits (100), Expect = 1e-04
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Frame = +1
Query: 166 VLLGPPGSGKGTQAPRLKEKY-CVCHLSTGDMLRAEVSS--GSDLGRRLKKVMDEGKLVS 336
++LG PGS K + R+ +KY LS GD+LR ++++ ++ ++ K M+ G +
Sbjct: 517 LVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIP 576
Query: 337 DEMVVDMIDKNLDQPECKN-GFLLDGFPXTVPQAEKLDDLLAKRKTA--LDAVIEFGIE 504
+M ++ + L N G++++G+P + Q L+ L + A +D +F +E
Sbjct: 577 TKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQRTDLAILIDCTEQFCLE 635
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +1
Query: 166 VLLGPPGSGKGTQAPRLKEKYC---VCHLSTGDMLRAEVSSGSDLGRRLKKVMDE---GK 327
+ +G PG GK A R+ + + H+ D++R + D K+ + G+
Sbjct: 173 LFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEHYIRGE 232
Query: 328 LVSDEMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLD 447
L+ +++ + ++ + + GF L+G+P Q E +
Sbjct: 233 LIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFE 272
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 44.4 bits (100), Expect = 1e-04
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Frame = +1
Query: 166 VLLGPPGSGKGTQAPRLKEKY-CVCHLSTGDMLRAEVSS--GSDLGRRLKKVMDEGKLVS 336
++LG PGS K + R+ +KY LS GD+LR ++++ ++ ++ K M+ G +
Sbjct: 517 LVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIP 576
Query: 337 DEMVVDMIDKNLDQPECKN-GFLLDGFPXTVPQAEKLDDLLAKRKTA--LDAVIEFGIE 504
+M ++ + L N G++++G+P + Q L+ L + A +D +F +E
Sbjct: 577 TKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQRTDLAILIDCTEQFCLE 635
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +1
Query: 166 VLLGPPGSGKGTQAPRLKEKYC---VCHLSTGDMLRAEVSSGSDLGRRLKKVMDE---GK 327
+ +G PG GK A R+ + + H+ D++R + D K+ + G+
Sbjct: 173 LFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEHYIRGE 232
Query: 328 LVSDEMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLD 447
L+ +++ + ++ + + GF L+G+P Q E +
Sbjct: 233 LIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFE 272
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 477 GRRNRVRNRGQSARKENYGQTDSPTXWSXLSRXVP 581
G+RN N G S+ NYGQ DS WS +R VP
Sbjct: 2031 GKRNSSTNTGNSSDIVNYGQYDS-MQWS-FARSVP 2063
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 477 GRRNRVRNRGQSARKENYGQTDSPTXWSXLSRXVP 581
G+RN N G S+ NYGQ DS WS +R VP
Sbjct: 2031 GKRNSSTNTGNSSDIVNYGQYDS-MQWS-FARSVP 2063
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 154 LKDPHQVLVSWLQRPVPYHQIL 89
LKDP+ + WL RP HQ++
Sbjct: 172 LKDPNMIFDFWLHRPEALHQVM 193
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 154 LKDPHQVLVSWLQRPVPYHQIL 89
LKDP+ + WL RP HQ++
Sbjct: 172 LKDPNMIFDFWLHRPEALHQVM 193
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 154 LKDPHQVLVSWLQRPVPYHQIL 89
LKDP+ + WL RP HQ++
Sbjct: 172 LKDPNMIFDFWLHRPEALHQVM 193
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 28.7 bits (61), Expect = 5.4
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Frame = +1
Query: 277 SGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNGFLLDGFPXTVPQAEKLDDLL 456
S S+ ++K+ D +DE ++D I+K + G+ + P+A L +++
Sbjct: 367 SSSEEDDEVEKIRDPKVRYADEPLID-IEKKF----AEMGYTIK-LSKEHPKAGMLKEIV 420
Query: 457 AKRKTALDAVIEFGIEDSLLVRRITG---RLIHPPXGRXYHEXFHPPXKPMTDDVTGEAL 627
+R+T D + + DS++ T RLI Y+E P P+ D +
Sbjct: 421 ERRETVRDPGLLNSLHDSIMFFEYTAVELRLIDQGPENSYNELATRPF-PLHDLLASTYE 479
Query: 628 IKRSDDNV 651
+KR D+ +
Sbjct: 480 VKRRDNTL 487
>Z68298-3|CAA92600.2| 357|Caenorhabditis elegans Hypothetical
protein F44D12.4 protein.
Length = 357
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 456 GEAQDCTGRRNRVRNRGQSARKENYGQ 536
G+ C R+R R+RG R+ NYG+
Sbjct: 3 GQGAPCRRSRSRSRSRGAFNRRSNYGE 29
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 295 RRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNG 396
+RLKK M +G+ +DE +VD + + L+ +G
Sbjct: 673 KRLKKQMGKGRSQADERIVDEMAEKLELKRSSDG 706
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 295 RRLKKVMDEGKLVSDEMVVDMIDKNLDQPECKNG 396
+RLKK M +G+ +DE +VD + + L+ +G
Sbjct: 673 KRLKKQMGKGRSQADERIVDEMAEKLELKRSSDG 706
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,831,375
Number of Sequences: 27780
Number of extensions: 340104
Number of successful extensions: 961
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -