Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_H24
(954 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 157 4e-37
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 147 4e-34
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 136 1e-30
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 119 1e-25
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 106 1e-21
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 105 2e-21
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 101 3e-20
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 100 1e-19
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 95 2e-18
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 93 1e-17
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 83 1e-14
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 81 3e-14
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 76 1e-12
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 71 4e-11
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 70 8e-11
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 66 1e-09
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 59 2e-07
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 55 2e-06
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 54 7e-06
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 53 9e-06
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 51 4e-05
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 50 9e-05
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 48 4e-04
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 48 4e-04
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 48 5e-04
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 48 5e-04
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 47 8e-04
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 46 0.001
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 45 0.002
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 43 0.010
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 42 0.018
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 42 0.031
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 39 0.22
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 37 0.66
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 36 1.2
UniRef50_Q010M7 Cluster: Predicted membrane protein; n=3; Eukary... 35 2.7
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 35 3.5
UniRef50_Q10R38 Cluster: Transposon protein, putative, CACTA, En... 34 4.6
UniRef50_Q4A263 Cluster: Putative membrane protein; n=1; Emilian... 34 6.1
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 34 6.1
UniRef50_A7BBR4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triti... 33 8.1
UniRef50_Q01AC1 Cluster: Meltrins, fertilins and related Zn-depe... 33 8.1
UniRef50_Q9NAG7 Cluster: Putative uncharacterized protein; n=2; ... 33 8.1
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 157 bits (381), Expect = 4e-37
Identities = 75/91 (82%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
Frame = +3
Query: 171 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 347
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 348 TTRKTPCGEGSXTCDRFQMRIHKRVIDLHSP 440
TTRKTPCGEGS T DRFQMRIHKR+IDLHSP
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSP 96
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 147 bits (356), Expect = 4e-34
Identities = 72/91 (79%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Frame = +3
Query: 171 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 347
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 348 TTRKTPCGEGSXTCDRFQMRIHKRVIDLHSP 440
TTRKTPCGEGS T DRFQMRIHKR+IDLHSP
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSP 94
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 136 bits (328), Expect = 1e-30
Identities = 63/87 (72%), Positives = 76/87 (87%)
Frame = +3
Query: 180 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 359
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 360 TPCGEGSXTCDRFQMRIHKRVIDLHSP 440
TP GEGS T + ++MRIHKR+IDLHSP
Sbjct: 68 TPNGEGSKTWETYEMRIHKRLIDLHSP 94
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 119 bits (287), Expect = 1e-25
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = +3
Query: 153 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 332
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 333 KILRITTRKTPCGEGSXTCDRFQMRIHKRVIDLHS 437
K+LR+TTRKTPCGEGS T DRFQ+RIHKRVIDL S
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLS 94
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 106 bits (254), Expect = 1e-21
Identities = 50/88 (56%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +3
Query: 171 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 347
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 348 TTRKTPCGEGSXTCDRFQMRIHKRVIDL 431
T RK+PCGEGS T DRF+MRI+KR+IDL
Sbjct: 64 TVRKSPCGEGSKTWDRFEMRIYKRIIDL 91
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 105 bits (251), Expect = 2e-21
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +3
Query: 273 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCDRFQMRIHKRVIDLHSP 440
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGS T DRFQMRIHKRVIDL+SP
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSP 458
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 101 bits (242), Expect = 3e-20
Identities = 42/87 (48%), Positives = 66/87 (75%)
Frame = +3
Query: 180 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 359
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 360 TPCGEGSXTCDRFQMRIHKRVIDLHSP 440
TPCG G+ T D F+++I+KR+IDLH+P
Sbjct: 65 TPCGNGTNTWDTFELKIYKRIIDLHAP 91
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 99.5 bits (237), Expect = 1e-19
Identities = 47/87 (54%), Positives = 63/87 (72%)
Frame = +3
Query: 171 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 350
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 351 TRKTPCGEGSXTCDRFQMRIHKRVIDL 431
TRKTPCGEGS T D +QMRI+KRV+ +
Sbjct: 65 TRKTPCGEGSKTWDHYQMRIYKRVLSM 91
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 95.5 bits (227), Expect = 2e-18
Identities = 38/74 (51%), Positives = 57/74 (77%)
Frame = +3
Query: 216 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCDR 395
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PCGEG+ T D+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 396 FQMRIHKRVIDLHS 437
F+M+IHKR+ID HS
Sbjct: 76 FEMKIHKRIIDFHS 89
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/94 (46%), Positives = 63/94 (67%)
Frame = +3
Query: 147 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 326
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 327 PTKILRITTRKTPCGEGSXTCDRFQMRIHKRVID 428
P + LRITTR+ PCG G+ T D F++RI+KRVID
Sbjct: 61 PRRRLRITTRRAPCGNGTETYDHFELRIYKRVID 94
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/57 (71%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = +3
Query: 171 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKI 338
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV 60
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 81.4 bits (192), Expect = 3e-14
Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Frame = +3
Query: 180 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 341
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 342 RITTRKTPCGEGSXTCDRFQMRIHKRVIDLHSPL 443
++T RK+PCGEGS T DRF+MRIHKRVID L
Sbjct: 66 KMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTL 99
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 76.2 bits (179), Expect = 1e-12
Identities = 31/71 (43%), Positives = 51/71 (71%)
Frame = +3
Query: 219 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCDRF 398
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G+ T +++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 399 QMRIHKRVIDL 431
+MR+H+R+ID+
Sbjct: 66 EMRMHRRIIDI 76
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 70.9 bits (166), Expect = 4e-11
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +3
Query: 204 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 380
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 381 XTCDRFQMRIHKRVIDL 431
T D ++MRIHKRV+D+
Sbjct: 78 HTYDHWEMRIHKRVVDM 94
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 70.1 bits (164), Expect = 8e-11
Identities = 30/73 (41%), Positives = 48/73 (65%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P GEGS T D
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 393 RFQMRIHKRVIDL 431
++MR+HKR+ID+
Sbjct: 67 HWEMRVHKRLIDI 79
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/76 (40%), Positives = 50/76 (65%)
Frame = +3
Query: 204 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSX 383
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P GEG+
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 384 TCDRFQMRIHKRVIDL 431
D ++MRIHKR+ID+
Sbjct: 63 VFDHWEMRIHKRLIDV 78
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 58.8 bits (136), Expect = 2e-07
Identities = 26/73 (35%), Positives = 44/73 (60%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG +
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 393 RFQMRIHKRVIDL 431
++M++HKR+ID+
Sbjct: 64 HWEMKVHKRIIDI 76
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/72 (33%), Positives = 44/72 (61%)
Frame = +3
Query: 216 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCDR 395
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+ + G+ D
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 396 FQMRIHKRVIDL 431
+QMRIH+R+ID+
Sbjct: 64 YQMRIHRRIIDI 75
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 53.6 bits (123), Expect = 7e-06
Identities = 23/66 (34%), Positives = 41/66 (62%)
Frame = +3
Query: 222 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCDRFQ 401
I + ++++ +E+ ++ + + GP R P + L ITTRK+PCGEG+ T RF+
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPCGEGTNTWHRFE 84
Query: 402 MRIHKR 419
+R++KR
Sbjct: 85 LRMYKR 90
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 53.2 bits (122), Expect = 9e-06
Identities = 25/75 (33%), Positives = 46/75 (61%)
Frame = +3
Query: 207 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXT 386
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P +
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDS 59
Query: 387 CDRFQMRIHKRVIDL 431
++F++RIH R++D+
Sbjct: 60 REQFEIRIHARMLDI 74
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 51.2 bits (117), Expect = 4e-05
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = +3
Query: 189 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 368
QA +IRI L S ++ C ++ AK + RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSP- 89
Query: 369 GEGSXTCDRFQMRIHKRVIDLHSP 440
+ + F+ R H R+ID+H P
Sbjct: 90 HVNKDSREHFETRTHHRLIDVHQP 113
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 50.0 bits (114), Expect = 9e-05
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 393 RFQMRIHKRVIDLHSP 440
++++R HKR+ID+ P
Sbjct: 64 QYEIRTHKRLIDIVDP 79
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 48.0 bits (109), Expect = 4e-04
Identities = 22/77 (28%), Positives = 46/77 (59%)
Frame = +3
Query: 210 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTC 389
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P +
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 390 DRFQMRIHKRVIDLHSP 440
++F++R HKR++ + P
Sbjct: 62 EQFEIRKHKRLLVIDDP 78
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 48.0 bits (109), Expect = 4e-04
Identities = 22/76 (28%), Positives = 48/76 (63%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P + + +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 393 RFQMRIHKRVIDLHSP 440
+F++R HKR++D+ P
Sbjct: 64 QFEVRTHKRMLDILEP 79
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 47.6 bits (108), Expect = 5e-04
Identities = 22/76 (28%), Positives = 44/76 (57%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P + +
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSRE 72
Query: 393 RFQMRIHKRVIDLHSP 440
+F++R H+R+ID+ +P
Sbjct: 73 QFEIRTHRRLIDILNP 88
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 47.6 bits (108), Expect = 5e-04
Identities = 25/76 (32%), Positives = 44/76 (57%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 393 RFQMRIHKRVIDLHSP 440
++++R +KR+ID+ P
Sbjct: 64 QYEIRTYKRLIDIVQP 79
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 46.8 bits (106), Expect = 8e-04
Identities = 29/97 (29%), Positives = 47/97 (48%)
Frame = +3
Query: 150 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 329
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 330 TKILRITTRKTPCGEGSXTCDRFQMRIHKRVIDLHSP 440
TK K+P F++R H+R+ID+ P
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYP 168
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/75 (30%), Positives = 44/75 (58%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P + + +
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSRE 61
Query: 393 RFQMRIHKRVIDLHS 437
+FQ+ +HK +++L S
Sbjct: 62 QFQLAVHKCLLELSS 76
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/76 (30%), Positives = 44/76 (57%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+IRI L + R L++ ++ AK+ + GP+ +PT+ T ++P + + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 393 RFQMRIHKRVIDLHSP 440
+F+MR HKR+ID+ +P
Sbjct: 64 QFEMRTHKRLIDIVNP 79
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 43.2 bits (97), Expect = 0.010
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+IRI L + + R L++ ++ AK+ V GP+ +PT+ I T + + +
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSRE 63
Query: 393 RFQMRIHKRVIDLHSP 440
+F+MR HKR+ID+ +P
Sbjct: 64 QFEMRTHKRLIDIVNP 79
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 42.3 bits (95), Expect = 0.018
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+IRI L + + R L+ C +I A + GP+ +PTK ++P + + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVD-KDSRE 67
Query: 393 RFQMRIHKRVIDLHSP 440
F+ R H+R+ID++SP
Sbjct: 68 HFETRTHRRIIDIYSP 83
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 41.5 bits (93), Expect = 0.031
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
++RI L+S + L C +++ K+ VKGPV +PT+ ++P + +
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSRE 70
Query: 393 RFQMRIHKRVIDLHS 437
F++R H R+ID+ S
Sbjct: 71 HFEIRSHFRIIDISS 85
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 38.7 bits (86), Expect = 0.22
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 207 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSX 383
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P +
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KK 61
Query: 384 TCDRFQMRIHKRVIDLHS 437
+ ++F++R + + I + S
Sbjct: 62 SREQFEIRTYTKTIQIES 79
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 37.1 bits (82), Expect = 0.66
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
++ I + S + + KVC + K ++ +P K+ ITT + P G+G+
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 393 RFQMRIHKR 419
R++M +H R
Sbjct: 80 RYKMIVHLR 88
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 36.3 bits (80), Expect = 1.2
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +3
Query: 210 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTC 389
+ ++I L S + R L++ +I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSR 61
Query: 390 DRFQMRIHKRVIDL 431
++F+ R H+R+I L
Sbjct: 62 EQFERRTHQRLIIL 75
>UniRef50_Q010M7 Cluster: Predicted membrane protein; n=3;
Eukaryota|Rep: Predicted membrane protein - Ostreococcus
tauri
Length = 1449
Score = 35.1 bits (77), Expect = 2.7
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWX 683
P P P PPPP SPP SP PP P P P+ P +
Sbjct: 850 PPPAPSPPPPPNPPPAPTPPPPPSPPPSPPPSPPPPPSPPPPPSPPPSPSPPPSSNPPLS 909
Query: 684 NXPP 695
+ PP
Sbjct: 910 SPPP 913
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 34.7 bits (76), Expect = 3.5
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 213 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCD 392
+IRI L S + ++K ++ K V GP+ +PT RI T + +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 393 RFQMRIHKRVIDLHS 437
+F++ +KR+ID++S
Sbjct: 63 QFELSSYKRLIDIYS 77
>UniRef50_Q10R38 Cluster: Transposon protein, putative, CACTA,
En/Spm sub-class; n=2; Oryza sativa|Rep: Transposon
protein, putative, CACTA, En/Spm sub-class - Oryza
sativa subsp. japonica (Rice)
Length = 209
Score = 34.3 bits (75), Expect = 4.6
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFP 620
PS T P L PPPP SSPP P PP P
Sbjct: 55 PSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPP 93
>UniRef50_Q4A263 Cluster: Putative membrane protein; n=1; Emiliania
huxleyi virus 86|Rep: Putative membrane protein -
Emiliania huxleyi virus 86
Length = 403
Score = 33.9 bits (74), Expect = 6.1
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP SSPP SP PP P
Sbjct: 140 PPPPPPPSSPPPSPPPPSSP 159
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 33.9 bits (74), Expect = 6.1
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +3
Query: 216 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCDR 395
I+I L + + +++ +I+ K ++GP+ +PT+ T ++P + ++
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPF-VNKDSREQ 67
Query: 396 FQMRIHKRVIDLHSP 440
F+ R HKR+I + +P
Sbjct: 68 FERRTHKRLIQIINP 82
>UniRef50_A7BBR4 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 409
Score = 33.5 bits (73), Expect = 8.1
Identities = 28/90 (31%), Positives = 36/90 (40%)
Frame = -1
Query: 693 GGXXXKXNQGMVXRWGXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXGXSXDILMGGXAXA 514
GG G G G S G GG GTG G G GGG G +GG +
Sbjct: 117 GGAGGAGGAGGAGGAGGAGGAGSYGG--GGGGTGGGGGFGGGGGTGGGG----LGGLSGQ 170
Query: 513 SXMVTSTFTPGLDVN*GDLFHNFRGESVGR 424
S M + + PGL + H+ +G G+
Sbjct: 171 STMPSLSNNPGLGDDSAKDGHDGKGGQDGK 200
>UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triticum
aestivum|Rep: Cold shock domain protein 3 - Triticum
aestivum (Wheat)
Length = 231
Score = 33.5 bits (73), Expect = 8.1
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -3
Query: 667 RXGYXVGXARXXGQ*XGKXGGXGDXGGDEXXXGGGGXRXVKXYFNGRXCXXVG-DGHVN 494
R GY G G G GG G GG GGGG GR C G DGH++
Sbjct: 92 RGGYGGGGGGYGGGGGGYGGGGGGYGGGGGGYGGGGYGGGGG--GGRGCYKCGEDGHIS 148
>UniRef50_Q01AC1 Cluster: Meltrins, fertilins and related
Zn-dependent metalloproteinases of the ADAMs family;
n=2; Ostreococcus tauri|Rep: Meltrins, fertilins and
related Zn-dependent metalloproteinases of the ADAMs
family - Ostreococcus tauri
Length = 872
Score = 33.5 bits (73), Expect = 8.1
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFP 620
PSP P PPPP S PP SP PP P
Sbjct: 509 PSPPPSPPPPSPPPSPPPSPPPPSPPSPPPPSPSPPPSP 547
>UniRef50_Q9NAG7 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 448
Score = 33.5 bits (73), Expect = 8.1
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +2
Query: 377 FKXLRSFSDANPQESDRPTLSPLKL*NRSPQLTSSPGV------KVDVTIXDAXAXPPIK 538
F L FS P PTL+P + + SPQ ++SPGV + + + PPI
Sbjct: 96 FPSLPLFSPTVPTSLPTPTLTPTIISSVSPQCSTSPGVFNTLNTLLQMESLSKCSTPPIN 155
Query: 539 ISFDXPXTP 565
IS TP
Sbjct: 156 ISHSPTTTP 164
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,195,913
Number of Sequences: 1657284
Number of extensions: 14551271
Number of successful extensions: 86747
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 39394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73032
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -