Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_H24
(954 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55959| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 1e-25
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.4
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_26939| Best HMM Match : Drf_FH1 (HMM E-Value=9.2) 30 2.4
SB_5678| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=1.3) 30 2.4
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 30 2.4
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 30 3.2
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 30 3.2
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 3.2
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.2
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.5
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.5
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 7.3
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 28 9.7
SB_43407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 28 9.7
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 28 9.7
>SB_55959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 114 bits (274), Expect = 1e-25
Identities = 53/70 (75%), Positives = 61/70 (87%), Gaps = 2/70 (2%)
Frame = +3
Query: 237 RNVRSLEKV--CADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTCDRFQMRI 410
+ VR+ KV CADLI GAK++KL+VKGPVRMPTK LRITTRKTPCGEGS T DR++MRI
Sbjct: 6 KKVRTTRKVTVCADLIRGAKEKKLKVKGPVRMPTKFLRITTRKTPCGEGSKTWDRYEMRI 65
Query: 411 HKRVIDLHSP 440
HKR+IDLHSP
Sbjct: 66 HKRLIDLHSP 75
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 439 PSEIVKQITSINIXP 483
PSEIVKQITSI+I P
Sbjct: 75 PSEIVKQITSISIEP 89
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.1 bits (67), Expect = 1.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP PP P PP FP
Sbjct: 470 PPPPPPPPPPPPPPPPPPFP 489
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*P 632
PPPP PP P PP P + P
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPPFPP 490
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY 626
PPPP PP P PP P +
Sbjct: 477 PPPPPPPPPPPFPPPPPPTPLH 498
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 206 YSPHQDHSYFSQCALTR---EGLC*PNQWSQETEAACKGPSPHANQDPAYHHP 355
Y P +SY + CA T+ +G + A+ + PH N DPA+ P
Sbjct: 267 YDPQNPYSYGAYCAYTQAQPQGFNAQAYPYENNSASARPAMPHYNSDPAHTEP 319
>SB_26939| Best HMM Match : Drf_FH1 (HMM E-Value=9.2)
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPT 653
PPPP SPP SP PP P P A PT
Sbjct: 31 PPPP----SPPPSPPPPSPPLDCPCLTAYPT 57
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPT 653
PPPP SPP SP PP P P A PT
Sbjct: 154 PPPP----SPPPSPPPPSPPLDCPCLTAYPT 180
>SB_5678| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=1.3)
Length = 292
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = -1
Query: 666 GMVXRWGXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXGXSXDILMGGXAXASXMVTSTFT 487
GM+ G +S G G G G GM G GG+ G + + G + M+
Sbjct: 159 GMMGGGSMGGGMMSMAGGGMGGGMGGGMGGGMEGGMGGGMMEGMQGMGSMGGGMMGGGMG 218
Query: 486 PGLDVN 469
G+ N
Sbjct: 219 GGMGFN 224
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 236 SQCALTREGLC*PNQWSQETEAACKGPSPHANQDPAYHHP 355
S C GLC P + ++ + GPSP + DP+ P
Sbjct: 412 SICLCAPSGLCVPIHFLPNSDPSLAGPSPSSKLDPSIRDP 451
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 171 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCAD 272
+ + K Q E + IH + +T ++VRSLE+ C +
Sbjct: 663 RQLHKIQEESTRIHHLAVTALEKDVRSLEQRCLE 696
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -1
Query: 702 NSKGGXXXKXNQGMVXRWGXPGXXVSXRGNXGGXGTGXGMRXGXGGG 562
N +GG +QG R G G S RG GG G G G GGG
Sbjct: 180 NERGGGG---SQGGGYRSGGGGYGGSSRGGYGGGRGGGGYGGGRGGG 223
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -1
Query: 705 ANSKGGXXXKXNQGMVXRWGXPGXXVSXRGNXGGXGTGXGMRXGXGGG 562
A +G +QG R G G S RG GG G G G GGG
Sbjct: 85 AQPRGERGGGGSQGGGYRSGGGGYGGSSRGGYGGGRGGGGYGGGRGGG 132
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP S PP P PP P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSP 389
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P SPPPP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPP 392
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP PP SP PP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPP 384
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP SPP P PP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPP 399
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P +PPPP
Sbjct: 403 PPPPPPPPPPPPPPPPAPPPP 423
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P + PPPP
Sbjct: 405 PPPPPPPPPPPPPPAPPPPPP 425
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPP 611
PPPP SPP P PP
Sbjct: 369 PPPPPPPPSPPPPPPPP 385
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P PP P PP P PPPP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPP 401
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFP 620
PSP P PPPP PP P PP P
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P PP P PP P PPPP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXL 668
PPPP PP P PP P P P P L
Sbjct: 399 PPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPAL 434
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 546 LTXRXPPPPXXXSSPPXSPXPP 611
+T PPPP SPP P PP
Sbjct: 201 ITQPPPPPPRPPPSPPPPPPPP 222
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPP 611
PPPP SPP P PP
Sbjct: 217 PPPPPPSPSPPRPPPPP 233
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 598 PPXPPI-SPXTDXXXWPPPPXNHXLIXFGXTPP 693
PP PPI P T PPPP G PP
Sbjct: 341 PPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPP 373
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 598 PPXPPI-SPXTDXXXWPPPPXNHXLIXFGXTPP 693
PP PPI P T PPPP G PP
Sbjct: 253 PPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPP 285
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 895 PXXXXPXPPXXPXSXSPPPP 954
P P PP P S SPPPP
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPP 1176
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP PP SP PP P
Sbjct: 1158 PPPPPPPPPPPSSPSPPPPP 1177
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP SPP P PP P
Sbjct: 1164 PPPPPSSPSPPPPPPPPPPP 1183
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP S PP P PP P
Sbjct: 1165 PPPPSSPSPPPPPPPPPPPP 1184
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P +PPPP
Sbjct: 689 PPPPPPPPPPPPPQPSTPPPP 709
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P + PPPP
Sbjct: 691 PPPPPPPPPPPQPSTPPPPPP 711
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 661 GYXVGXARXXGQ*XGKXGGXGDXGGDEXXXGGGGXRXVK 545
GY G G G GG G GG GGGG +K
Sbjct: 841 GYADGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVIK 879
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P + PPPP
Sbjct: 225 PPPPAAPAPPPPPAAAPPPPP 245
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 880 FXXXPPXXXXPXPPXXPXSXSPPPP 954
F PP P PP P PPPP
Sbjct: 88 FSPNPPYPPPPYPPYPPPPPYPPPP 112
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P + PPPP
Sbjct: 368 PPPTNKPPPPPPPTNGPPPPP 388
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P + PPPP
Sbjct: 378 PPPTNGPPPPPPPTNGPPPPP 398
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P + PPPP
Sbjct: 388 PPPTNGPPPPPPPTNGPPPPP 408
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
P P P T PPPP + PP P P P P P P
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPP 398
>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 555 RXPPPPXXXSSPPXSPXPPXFP 620
R PPPP SPP PP P
Sbjct: 140 RNPPPPPPPPSPPPPCHPPALP 161
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P PPPP
Sbjct: 195 PPPPPPPPPPGFPGGAPPPPP 215
>SB_43407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPP 611
PPPP S PP P PP
Sbjct: 237 PPPPPYTSLPPDDPPPP 253
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP +PP P PP P
Sbjct: 305 PPPPPPGGAPPPPPPPPPPP 324
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 507 SPTXXXXRPLKYX-LTXRXPP-PPXXXSSPPX-SPXPPXFP 620
SP P++Y L R PP PP SS P P PP +P
Sbjct: 316 SPLRYPPSPIRYPPLPSRYPPSPPRYPSSHPRYPPSPPRYP 356
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,165,415
Number of Sequences: 59808
Number of extensions: 461439
Number of successful extensions: 2424
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2035
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2800542235
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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