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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H24
         (954 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-13|CAD21665.1|  117|Caenorhabditis elegans Hypothetical...   134   1e-31
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    34   0.13 
AL117203-3|CAB55101.1|  448|Caenorhabditis elegans Hypothetical ...    33   0.23 
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    33   0.23 
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    32   0.70 
AF098500-3|ABD94103.1|  774|Caenorhabditis elegans Temporarily a...    30   2.1  
AF098500-2|AAC67399.2|  996|Caenorhabditis elegans Temporarily a...    30   2.1  
AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical...    30   2.1  
AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical...    30   2.1  
AC024790-10|AAF60632.2|  129|Caenorhabditis elegans Hypothetical...    30   2.1  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   2.8  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   2.8  
AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical...    30   2.8  
AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein p...    30   2.8  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   2.8  
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    29   3.7  
AC025723-10|AAK29940.1|  691|Caenorhabditis elegans Mammalian fe...    29   3.7  
Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U40802-3|AAM81105.1|  369|Caenorhabditis elegans Dense body prot...    29   4.9  
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot...    29   4.9  
U40802-1|AAM81106.1|  999|Caenorhabditis elegans Dense body prot...    29   4.9  
U14635-1|AAC46657.2|  448|Caenorhabditis elegans Hypothetical pr...    29   4.9  
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele...    29   4.9  
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/...    29   6.5  
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/...    29   6.5  
AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen prot...    29   6.5  
Z77663-1|CAB01210.1|   94|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical p...    28   8.6  
Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical p...    28   8.6  
U55854-5|AAA98014.1|  103|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>AL132876-13|CAD21665.1|  117|Caenorhabditis elegans Hypothetical
           protein Y105E8A.16 protein.
          Length = 117

 Score =  134 bits (323), Expect = 1e-31
 Identities = 60/77 (77%), Positives = 70/77 (90%)
 Frame = +3

Query: 210 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXTC 389
           HRIR+TLTS+NV+ LEKVCA LI+GAK + L VKGP+RMPTK+LRITTRKTPCGEGS T 
Sbjct: 17  HRIRLTLTSQNVKPLEKVCAQLIDGAKNEHLIVKGPIRMPTKVLRITTRKTPCGEGSKTW 76

Query: 390 DRFQMRIHKRVIDLHSP 440
           DRFQMRIHKR+I+LH+P
Sbjct: 77  DRFQMRIHKRLINLHAP 93


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -1

Query: 672 NQGMVXRWGXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXG 553
           N G    WG  G   +  G  GG G G G R G GGG  G
Sbjct: 74  NNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGG 113



 Score = 31.5 bits (68), Expect = 0.92
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = -1

Query: 696 KGGXXXKXNQGMVXRWGXPGXXVSXRGNXGGXGTGXGMRXGXGGG 562
           +GG       G    WG  G   +  GN GG   G G   G GGG
Sbjct: 57  RGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGG 101



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/57 (35%), Positives = 23/57 (40%)
 Frame = -3

Query: 724 RSXGFPRQF*GGXLXQXXSRXGYXVGXARXXGQ*XGKXGGXGDXGGDEXXXGGGGXR 554
           RS G+ R   GG       R G   G     G   G  GG G+ GG+     GGG R
Sbjct: 39  RSGGWGRPGWGGG-GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGR 94


>AL117203-3|CAB55101.1|  448|Caenorhabditis elegans Hypothetical
           protein Y48C3A.4 protein.
          Length = 448

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +2

Query: 377 FKXLRSFSDANPQESDRPTLSPLKL*NRSPQLTSSPGV------KVDVTIXDAXAXPPIK 538
           F  L  FS   P     PTL+P  + + SPQ ++SPGV       + +      + PPI 
Sbjct: 96  FPSLPLFSPTVPTSLPTPTLTPTIISSVSPQCSTSPGVFNTLNTLLQMESLSKCSTPPIN 155

Query: 539 ISFDXPXTP 565
           IS     TP
Sbjct: 156 ISHSPTTTP 164


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -2

Query: 953 GGGGXXDXGWXGGXGXXXXGGXXXKKGXXXXGPP 852
           GGGG  D GW G  G    G     +G    GPP
Sbjct: 116 GGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPP 149



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 19/57 (33%), Positives = 21/57 (36%)
 Frame = -1

Query: 696 KGGXXXKXNQGMVXRWGXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXGXSXDILMGG 526
           +GG     N G    WG  G      G  GG G G G R   GG   G   +   GG
Sbjct: 63  RGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGG 119


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = +1

Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
           P    P F   PP    P PP  P    PPPP
Sbjct: 48  PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79



 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPPXFPXY*P 632
           PPPP     P   P PP  P Y P
Sbjct: 63  PPPPPPPPPPMCPPPPPPMPSYSP 86



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +1

Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
           PP    P PP  P    PPPP
Sbjct: 40  PPPLPCPPPPICPPQFCPPPP 60


>AF098500-3|ABD94103.1|  774|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 343, isoform b protein.
          Length = 774

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPPXFP 620
           PPPP   S+PP  P PP  P
Sbjct: 76  PPPPLPLSNPPAKPTPPPPP 95


>AF098500-2|AAC67399.2|  996|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 343, isoform a protein.
          Length = 996

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPPXFP 620
           PPPP   S+PP  P PP  P
Sbjct: 298 PPPPLPLSNPPAKPTPPPPP 317


>AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15a protein.
          Length = 933

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 461 SPQLTSSPGVKVDVTIXDAXAXPPIKISFDXPXTPPPXPXLIP 589
           SP+L   P V   + +  A   PP  ++   P  PPP P ++P
Sbjct: 763 SPRLPPKPSVAQTIAMHSA---PPSPLTAPIPPPPPPPPPMLP 802


>AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15b protein.
          Length = 832

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 461 SPQLTSSPGVKVDVTIXDAXAXPPIKISFDXPXTPPPXPXLIP 589
           SP+L   P V   + +  A   PP  ++   P  PPP P ++P
Sbjct: 662 SPRLPPKPSVAQTIAMHSA---PPSPLTAPIPPPPPPPPPMLP 701


>AC024790-10|AAF60632.2|  129|Caenorhabditis elegans Hypothetical
           protein Y47D7A.11 protein.
          Length = 129

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +3

Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFP 620
           P+P      P KY +    P PP     P  S  PP  P
Sbjct: 33  PTPPPSYPTPKKYPVAPTYPSPPAYAQKPSYSAPPPPAP 71


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 847 VXGGPXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
           + GGP    P     P     P PP  P    PPPP
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 598 PPXPPISPXTDXXXWPPPPXNHXLIXFGXTPP 693
           PP P + P T     PPPP     I  G  PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 847 VXGGPXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
           + GGP    P     P     P PP  P    PPPP
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 598 PPXPPISPXTDXXXWPPPPXNHXLIXFGXTPP 693
           PP P + P T     PPPP     I  G  PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745


>AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical
           protein Y116A8C.32 protein.
          Length = 699

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -2

Query: 713 FSXPILRGGVXPKXIKXWLXGGGGQXXXSVXGEXGGXGG 597
           ++ P  RGG   K  K W   GGG          GG GG
Sbjct: 633 YTSPGARGGAGAKANKGWYGSGGGSSMPMPVPPPGGLGG 671


>AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein
           protein.
          Length = 699

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -2

Query: 713 FSXPILRGGVXPKXIKXWLXGGGGQXXXSVXGEXGGXGG 597
           ++ P  RGG   K  K W   GGG          GG GG
Sbjct: 633 YTSPGARGGAGAKANKGWYGSGGGSSMPMPVPPPGGLGG 671


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 847 VXGGPXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
           + GGP    P     P     P PP  P    PPPP
Sbjct: 321 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 598 PPXPPISPXTDXXXWPPPPXNHXLIXFGXTPP 693
           PP P + P T     PPPP     I  G  PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 546 LTXRXPPPPXXXSSPPXSPXPP 611
           +T R PPPP     PP  P PP
Sbjct: 283 MTPRPPPPPSSGMWPPPPPPPP 304


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 546 LTXRXPPPPXXXSSPPXSPXPP 611
           +T R PPPP     PP  P PP
Sbjct: 293 MTPRPPPPPSSGMWPPPPPPPP 314


>AC025723-10|AAK29940.1|  691|Caenorhabditis elegans Mammalian fe65
           homolog protein1, isoform a protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 555 RXPPPPXXXSSPPXSPXPPXFP 620
           R PPPP    +P  SP PP  P
Sbjct: 291 RQPPPPVRDVTPARSPSPPPLP 312


>Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical
           protein F02D10.1 protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -2

Query: 953 GGGGXXDXGWXGGXGXXXXGGXXXKKGXXXXGPP 852
           GGGG    G  GG G    GG     G    GPP
Sbjct: 89  GGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPP 122


>U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical
           protein F07C4.7 protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 621 RGNXGGXGTGXGMRXGXGGGVXG 553
           RG  GG G   G+R G GGG  G
Sbjct: 82  RGGNGGFGDNGGLRGGNGGGRGG 104


>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
           protein H03E18.1 protein.
          Length = 1147

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 252 LEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGE 374
           +E V A  + G KK+  + K   + PTK    +T++ P  E
Sbjct: 359 VELVTAKTVEGEKKETKKPKSTTKKPTKTAAASTKRPPTTE 399


>U40802-3|AAM81105.1|  369|Caenorhabditis elegans Dense body protein
           1, isoform b protein.
          Length = 369

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPPXF 617
           PPPP   S PP  P PP +
Sbjct: 150 PPPPVELSPPPRPPPPPEY 168


>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
           1, isoform a protein.
          Length = 1010

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPPXF 617
           PPPP   S PP  P PP +
Sbjct: 791 PPPPVELSPPPRPPPPPEY 809


>U40802-1|AAM81106.1|  999|Caenorhabditis elegans Dense body protein
           1, isoform c protein.
          Length = 999

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPPXF 617
           PPPP   S PP  P PP +
Sbjct: 791 PPPPVELSPPPRPPPPPEY 809


>U14635-1|AAC46657.2|  448|Caenorhabditis elegans Hypothetical
           protein C27H5.3 protein.
          Length = 448

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 619 GKXGGXGDXGGDEXXXGGGGXR 554
           G  GG G  GGD    GGGG R
Sbjct: 310 GPMGGRGGFGGDRGGYGGGGGR 331


>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
           C.elegans vinculin (deb-1) gene, complete cds. ).
          Length = 1010

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPPXF 617
           PPPP   S PP  P PP +
Sbjct: 791 PPPPVELSPPPRPPPPPEY 809


>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 2, isoform
           c protein.
          Length = 1510

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPP 611
           PPPP    SPP  P PP
Sbjct: 298 PPPPIKEESPPPPPPPP 314


>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 2, isoform
           a protein.
          Length = 1507

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 561 PPPPXXXSSPPXSPXPP 611
           PPPP    SPP  P PP
Sbjct: 298 PPPPIKEESPPPPPPPP 314


>AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen protein
           51 protein.
          Length = 435

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/45 (33%), Positives = 15/45 (33%)
 Frame = -3

Query: 694 GGXLXQXXSRXGYXVGXARXXGQ*XGKXGGXGDXGGDEXXXGGGG 560
           GG         GY  G         G  GG G  GG     GGGG
Sbjct: 324 GGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGG 368


>Z77663-1|CAB01210.1|   94|Caenorhabditis elegans Hypothetical
           protein F53F4.1 protein.
          Length = 94

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 618 GNXGGXGTGXGMRXGXGGGVXG 553
           G  GG GTG GM  G G G+ G
Sbjct: 39  GGYGGYGTGLGMYNGLGYGLGG 60


>Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical
           protein F32D8.7b protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = +3

Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXF 617
           P+PT    RP     T R  PPP     PP  P P  F
Sbjct: 225 PAPTLAPFRPRP---TTRRLPPPTTPPPPPPPPAPSPF 259


>Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical
           protein F32D8.7a protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = +3

Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXF 617
           P+PT    RP     T R  PPP     PP  P P  F
Sbjct: 223 PAPTLAPFRPRP---TTRRLPPPTTPPPPPPPPAPSPF 257


>U55854-5|AAA98014.1|  103|Caenorhabditis elegans Hypothetical
           protein C04G6.6 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 407 NPQESDRPTLSPLKL*NRSPQLTSS-PGVKVDVTIXDAXAXPPIKISFDXPXTPPPXP 577
           NP++  +  L   K  N   +++ S      ++ I DA   PP+K   +   +PPP P
Sbjct: 37  NPKKKPKKNLKNKKSRNSESEMSDSGKTTDCEMEISDADDYPPVKRYPNRRRSPPPPP 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,000,372
Number of Sequences: 27780
Number of extensions: 354830
Number of successful extensions: 2056
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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