Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_H24
(954 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47370.2 68416.m05151 40S ribosomal protein S20 (RPS20B) 40S ... 131 6e-31
At3g47370.1 68416.m05150 40S ribosomal protein S20 (RPS20B) 40S ... 131 6e-31
At5g62300.1 68418.m07821 40S ribosomal protein S20 (RPS20C) ribo... 129 2e-30
At3g45030.1 68416.m04851 40S ribosomal protein S20 (RPS20A) 40S ... 129 2e-30
At3g13120.1 68416.m01642 30S ribosomal protein S10, chloroplast,... 47 2e-05
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 35 0.069
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 33 0.37
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 33 0.37
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 33 0.37
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 32 0.64
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 31 0.85
At1g61080.1 68414.m06877 proline-rich family protein 31 0.85
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 31 1.1
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 31 1.1
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 31 1.5
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 31 1.5
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 31 1.5
At4g38680.1 68417.m05477 cold-shock DNA-binding family protein c... 30 2.0
At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS cla... 30 2.0
At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS cla... 30 2.0
At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS cla... 30 2.0
At1g27710.1 68414.m03387 glycine-rich protein 30 2.0
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 30 2.6
At4g01985.1 68417.m00265 expressed protein 30 2.6
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 29 3.4
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 3.4
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 3.4
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 29 3.4
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 3.4
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ... 29 4.5
At1g75550.1 68414.m08780 glycine-rich protein 29 4.5
At1g35617.1 68414.m04424 hypothetical protein 29 4.5
At1g26240.1 68414.m03201 proline-rich extensin-like family prote... 29 4.5
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 29 6.0
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 29 6.0
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 29 6.0
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 6.0
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 6.0
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 29 6.0
At1g11850.2 68414.m01364 expressed protein 29 6.0
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 29 6.0
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 28 7.9
At4g39260.2 68417.m05558 glycine-rich RNA-binding protein 8 (GRP... 28 7.9
At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP... 28 7.9
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 7.9
At4g18570.1 68417.m02749 proline-rich family protein common fami... 28 7.9
At4g08370.1 68417.m01382 proline-rich extensin-like family prote... 28 7.9
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 7.9
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 7.9
At1g02710.1 68414.m00222 glycine-rich protein 28 7.9
>At3g47370.2 68416.m05151 40S ribosomal protein S20 (RPS20B) 40S
RIBOSOMAL PROTEIN S20 - ARABIDOPSIS
THALIANA,PID:g1350956
Length = 122
Score = 131 bits (317), Expect = 6e-31
Identities = 57/83 (68%), Positives = 73/83 (87%)
Frame = +3
Query: 189 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 368
+A + IH+IRITL+S+NV++LEKVC DL+ GAK ++LRVKGPVRMPTK+L+ITTRK PC
Sbjct: 14 EAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPC 73
Query: 369 GEGSXTCDRFQMRIHKRVIDLHS 437
GEG+ T DRF++R+HKRVIDL S
Sbjct: 74 GEGTNTWDRFELRVHKRVIDLFS 96
>At3g47370.1 68416.m05150 40S ribosomal protein S20 (RPS20B) 40S
RIBOSOMAL PROTEIN S20 - ARABIDOPSIS
THALIANA,PID:g1350956
Length = 122
Score = 131 bits (317), Expect = 6e-31
Identities = 57/83 (68%), Positives = 73/83 (87%)
Frame = +3
Query: 189 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 368
+A + IH+IRITL+S+NV++LEKVC DL+ GAK ++LRVKGPVRMPTK+L+ITTRK PC
Sbjct: 14 EAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPC 73
Query: 369 GEGSXTCDRFQMRIHKRVIDLHS 437
GEG+ T DRF++R+HKRVIDL S
Sbjct: 74 GEGTNTWDRFELRVHKRVIDLFS 96
>At5g62300.1 68418.m07821 40S ribosomal protein S20 (RPS20C)
ribosomal protein S20, Arabidopsis thaliana, PIR:T12992
Length = 124
Score = 129 bits (312), Expect = 2e-30
Identities = 56/77 (72%), Positives = 70/77 (90%)
Frame = +3
Query: 207 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXT 386
IH+IRITL+S+NV++LEKVC DL+ GAK ++LRVKGPVRMPTK+L+ITTRK PCGEG+ T
Sbjct: 22 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNT 81
Query: 387 CDRFQMRIHKRVIDLHS 437
DRF++R+HKRVIDL S
Sbjct: 82 WDRFELRVHKRVIDLFS 98
>At3g45030.1 68416.m04851 40S ribosomal protein S20 (RPS20A) 40S
ribsomomal proteinS20, Arabidopsis thaliana, pir:T12992
Length = 124
Score = 129 bits (312), Expect = 2e-30
Identities = 56/77 (72%), Positives = 70/77 (90%)
Frame = +3
Query: 207 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSXT 386
IH+IRITL+S+NV++LEKVC DL+ GAK ++LRVKGPVRMPTK+L+ITTRK PCGEG+ T
Sbjct: 22 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNT 81
Query: 387 CDRFQMRIHKRVIDLHS 437
DRF++R+HKRVIDL S
Sbjct: 82 WDRFELRVHKRVIDLFS 98
>At3g13120.1 68416.m01642 30S ribosomal protein S10, chloroplast,
putative similar to 30S ribosomal protein S10 GB:P02364
[Escherichia coli] (est matches suggest the N-terminal
extension)
Length = 191
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/97 (29%), Positives = 47/97 (48%)
Frame = +3
Query: 150 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 329
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 330 TKILRITTRKTPCGEGSXTCDRFQMRIHKRVIDLHSP 440
TK K+P F++R H+R+ID+ P
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYP 168
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
PPPP S PP SP PP P Y P P P
Sbjct: 474 PPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPP 507
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 507 SPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
SP P Y PPPP S PP P PP P Y P P P
Sbjct: 425 SPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPP 476
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPP---PPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDX 674
P P P Y + PP PP PP SP PP +P P P P
Sbjct: 546 PPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTP 605
Query: 675 LWXNXPP 695
++ PP
Sbjct: 606 VYSPPPP 612
Score = 32.7 bits (71), Expect = 0.37
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*P 632
PPPP S PP P PP P Y P
Sbjct: 489 PPPPPVYSPPPPPPPPPPPPVYSP 512
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
PPPP PP P PP P Y P + P P
Sbjct: 459 PPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPP 492
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY 626
PPPP SSPP P P P Y
Sbjct: 512 PPPPPVYSSPPPPPSPAPTPVY 533
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFP 620
P P P+ PPPP SPP P PP P
Sbjct: 469 PPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPP 507
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFP 620
P P P+ PPPP SPP P PP P
Sbjct: 438 PPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPP 476
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P F P P P P SPPPP
Sbjct: 410 PPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPP 441
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P + PP P PP PPPP
Sbjct: 442 PPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPP 473
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P + PP P PP P SPPPP
Sbjct: 457 PPPPPPVYSPPPPP---PPPPPPPPVYSPPPP 485
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P + PP P PP PPPP
Sbjct: 473 PPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPP 504
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P+ PP PP P PPPP
Sbjct: 582 PPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPP 613
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWXNXPP 695
PPPP + PP SP PP P P P P + N PP
Sbjct: 77 PPPPPDLTPPPSSPPPPDAPPPIPIVFPPPIDSPPPES--TNSPP 119
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 531 PLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
P+ Y + PPPP PP + PP P Y P P P
Sbjct: 665 PVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPP 708
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 531 PLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
P+ Y + PPPP SP PP P Y P P P
Sbjct: 651 PVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSP 694
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 531 PLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
P Y T PPPP SP PP P Y P A P P
Sbjct: 609 PPTYYATQSPPPPPPPTYYAVQSPPPPP-PVYYPPVTASPPPPP 651
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 531 PLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXP 650
P+ Y + PPPP P PP P Y P P
Sbjct: 694 PVYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYPPVAKSP 733
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 507 SPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSP-XPPXFPXY*PXXLAXP 650
+P+ PL Y PPPP PP +P PP P Y P P
Sbjct: 609 TPSPPPPSPLYYPPVTPSPPPPSPVYYPPVTPSPPPPSPVYYPPVTPSP 657
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 507 SPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSP-XPPXFPXY*PXXLAXP 650
+P+ P+ Y PPPP PP +P PP P Y P P
Sbjct: 624 TPSPPPPSPVYYPPVTPSPPPPSPVYYPPVTPSPPPPSPVYYPSETQSP 672
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +3
Query: 531 PLKYXLTXRXPPPPXXXSSPPXSP-XPPXFPXY*PXXLAXP 650
P+ Y PPPP PP +P PP P Y P P
Sbjct: 602 PVYYPQVTPSPPPPSPLYYPPVTPSPPPPSPVYYPPVTPSP 642
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
P P P Y + PPPP P S PP Y P + P P
Sbjct: 505 PPPYVYSSPPPPYVYSSPPPPPPSPPPPCPESSPPPPVVYYAPVTQSPPPPSP 557
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 531 PLKYXLTXRXPPPPXXXSSPP--XSPXPPXFPXY*PXXLAXPTX*P 662
P+ Y + PPPP PP SP PP Y P + P P
Sbjct: 557 PVYYPPVTQSPPPPSPVYYPPVTNSPPPPSPVYYPPVTYSPPPPSP 602
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 874 PFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P F PP P PP P PPPP
Sbjct: 36 PLFPQSPPPPPPPPPPPPPPPPPPPPP 62
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 598 PPXPPISPXTDXXXWPPPPXNHXLIXFGXTPP 693
PP PP P PPPP + + G PP
Sbjct: 46 PPPPPPPPPPPPPPPPPPPAVNMSVETGIPPP 77
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXP 650
PPPP S PP SP PP P P + P
Sbjct: 64 PPPPPPTSPPPPSPPPPSPPPPSPPPPSPP 93
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXF 617
PP P S PP SP PP F
Sbjct: 79 PPSPPPPSPPPPSPPPPAF 97
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 549 TXRXPPPPXXXSSPPXSPXPPXFP 620
T PP P S PP SP PP P
Sbjct: 70 TSPPPPSPPPPSPPPPSPPPPSPP 93
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 31.5 bits (68), Expect = 0.85
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPP--PXXXSSPPXSPXPP 611
P PT +PLK PPP P ++PP P PP
Sbjct: 493 PPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPP 530
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P PP P PP P S PPPP
Sbjct: 1065 PQESPPPLPPLPPSPPPPSPPLPPSSLPPPPP 1096
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P F PP P PP SPPPP
Sbjct: 1093 PPPPAALFPPLPPPPSQPPPPPLSPPPSPPPP 1124
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 555 RXPPPPXXXSSPPXSP--XPPXFPXY*P 632
R PPPP S PP SP PP P Y P
Sbjct: 491 RSPPPPPVHSPPPPSPIHSPPPPPVYSP 518
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PXXXXPFFXXXPPXXXXPXPPXXPXSXSPPPP 954
P P PP P PP S PPPP
Sbjct: 501 PPPPSPIHSPPPPPVYSPPPPPPVYSPPPPPP 532
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWXNXPP 695
PPPP PP PP P Y P L P + PP
Sbjct: 646 PPPPVYSPPPPPVKSPPPPPVYSPPLLPPKMSSPPTQTPVNSPPP 690
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*P 632
PPPP S PP +P P P Y P
Sbjct: 37 PPPPQQHSQPPVAPLVPPGPPYAP 60
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWX 683
PSP +P Y + PPPP SSPP P P P + P P ++
Sbjct: 53 PSPPPYVYKPPPYIYSS-PPPPPYVYSSPPPPPYVYNSPPPPPYVYSSP---PPPPYVYK 108
Query: 684 NXPP 695
+ PP
Sbjct: 109 SPPP 112
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPP 611
P P P+K T PPPP ++ P P PP
Sbjct: 243 PPPPPPPPIPVKQSATPPPPPPPKLKNNGPSPPPPP 278
>At4g38680.1 68417.m05477 cold-shock DNA-binding family protein
contains Pfam domains PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 203
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 654 RWGXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXGXS 547
R G G RG+ GG G G G G GGG G S
Sbjct: 94 RGGFGGGRGGGRGSGGGYGGGGGGYGGRGGGGRGGS 129
>At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 801
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 462 DLFHNFRGESVGRSLSCGFASENDRRXLN 376
D+F NFRGE V SL E DR+ +N
Sbjct: 10 DVFPNFRGEDVRHSLVSHLRKELDRKFIN 38
>At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 796
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 462 DLFHNFRGESVGRSLSCGFASENDRRXLN 376
D+F NFRGE V SL E DR+ +N
Sbjct: 10 DVFPNFRGEDVRHSLVSHLRKELDRKFIN 38
>At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 520
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 462 DLFHNFRGESVGRSLSCGFASENDRRXLN 376
D+F NFRGE V SL E DR+ +N
Sbjct: 10 DVFPNFRGEDVRHSLVSHLRKELDRKFIN 38
>At1g27710.1 68414.m03387 glycine-rich protein
Length = 212
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 648 GXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXGXS 547
G PG G GG G G G+ G GGG G S
Sbjct: 155 GGPGYGSGGGGIGGGGGIGGGVIIGGGGGGCGGS 188
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 874 PFFXXXPPXXXXPXPPXXPXSXSPPP 951
P PP P PP P S SPPP
Sbjct: 129 PHHRHHPPPPPPPPPPRSPNSASPPP 154
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 693 GGXXXKXNQGMVXRWGXPGXXVSXRGNXGGX-GTGXGMRXGXGGGVXGXSXDILMGG 526
GG + +G G G V G GG G G G+ G GG + G + + GG
Sbjct: 103 GGGKGRGRKGGGGAGGGVGGGVGAGGGAGGSVGAGGGIGGGAGGAIGGGASGGVGGG 159
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -1
Query: 693 GGXXXKXNQGMVXRWGXPGXXVSXRGNXGGX-GTGXGMRXGXGGGVXG 553
GG G V G V G GG G G G+ G GGGV G
Sbjct: 237 GGGAGGSGGGSVGGGGRGSGGVGASGGAGGNVGAGGGLGGGVGGGVGG 284
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 618 GNXGGXGTGXGMRXGXGGGVXGXSXDILMGGXAXA 514
G G G G G+ G GGGV G + GG A
Sbjct: 493 GGGAGGGVGGGVGGGVGGGVRGAVGGAVGGGVGGA 527
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -1
Query: 648 GXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXG 553
G G V G GG G G G+ G GGGV G
Sbjct: 330 GGAGGSVGAGGGVGG-GVGGGVGGGVGGGVGG 360
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 648 GXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXGXSXDILMGG 526
G G + G G G G G+ G GGG+ G + + GG
Sbjct: 463 GGRGSGGAGGGTGGSVGAGGGVGVGGGGGIGGGAGGGVGGG 503
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -1
Query: 666 GMVXRWGXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXGXSXDILMGG 526
G V G G V G GG G G G+ G GG V G + GG
Sbjct: 410 GGVGGAGGAGGSVGAGGGVGG-GVGGGVGGGVGGAVGGAVGGAVGGG 455
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 531 PLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*P 632
P KY PPP PP PP P Y P
Sbjct: 183 PPKYSPPVEVPPPVPVYEPPPKKEIPPPVPVYDP 216
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
PPPP S PP PP P Y P P P
Sbjct: 535 PPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHSP 568
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPT 653
P PP SPP SP PP P + PT
Sbjct: 582 PSPPFTGPSPPSSPSPPLPPVIPSPPIVGPT 612
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 531 PLKYXLTXRXPPPPXXXSSPPXSPXPP 611
PLK PPPP + PP P PP
Sbjct: 255 PLKLPPGRSAPPPPPAAAPPPQPPPPP 281
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWXNXPP 695
PPPP PP P PP P P P P + PP
Sbjct: 384 PPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPP 428
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 880 FXXXPPXXXXPXPPXXPXSXSPPPP 954
F PP P PP P PPPP
Sbjct: 372 FGCSPPSPPPPPPPPPPPPPPPPPP 396
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*P 662
PPPP PP P PP P P P+ P
Sbjct: 382 PPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPP 415
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 859 PXXXXPF-FXXXPPXXXXPXPPXXPXSXSPPPP 954
P P+ + PP P PP P PPPP
Sbjct: 417 PPSPPPYVYPPPPPPYVYPPPPSPPYVYPPPPP 449
>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 423
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 692 GGVXPKXIKXWLXGGGGQXXXSVXGEXGGXGGXGXG 585
GGV + GGGG S G GG GG G G
Sbjct: 378 GGVGGGGAGGYGAGGGGNGGGSFYGGGGGRGGYGGG 413
>At1g75550.1 68414.m08780 glycine-rich protein
Length = 167
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 651 WGXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXG 553
WG G G GG G G G G GGG G
Sbjct: 69 WGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGG 101
>At1g35617.1 68414.m04424 hypothetical protein
Length = 121
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 546 LTXRXPP-PPXXXSSPPXSPXPPXFP 620
L R PP PP SSPP P PP P
Sbjct: 17 LDLRPPPAPPPESSSPPTPPEPPDPP 42
>At1g26240.1 68414.m03201 proline-rich extensin-like family protein
similar to hydroxyproline-rich glycoprotein precursor
gi|727264|gb|AAA87902; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 478
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWXNXPP 695
PPPP SSPP P P P P P + + PP
Sbjct: 431 PPPPYVYSSPPPPPYVYKSPSPPPYVYKSPPPPPSYSYSYSSPPP 475
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWX 683
PSP +P + + PPPP SSPP P P P + P P ++
Sbjct: 33 PSPPSYVYKPPTHIYSS-PPPPPYVYSSPPPPPYIYKSPPPPPYVYSSP---PPPPYIYK 88
Query: 684 NXPP 695
+ PP
Sbjct: 89 SPPP 92
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWXNXPP 695
PPPP SSPP SP P P + P P ++ + PP
Sbjct: 351 PPPPYVYSSPPPSPYVYKSPPPPPYVYSSP---PPPPYVYKSPPP 392
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 892 PPXXXXPXPPXXPXSXSPPPP 954
PP P PP P +PPPP
Sbjct: 373 PPPLQTPPPPPPPPPLAPPPP 393
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPP 611
PPPP SSPP S PP
Sbjct: 74 PPPPPSQSSPPRSRCPP 90
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 537 KYXLTXRXPPPPXXXSSPPXSPXPPXFP 620
K + + PPP SPP SP PP P
Sbjct: 28 KLLTSYKYSPPPPPVYSPPISPPPPPPP 55
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXP 608
P+PT P T P PP S PP +P P
Sbjct: 156 PTPTPSVPSPTPPVPTDPMPSPPPPVSPPPPTPTP 190
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPP SPP SP PP P
Sbjct: 76 PPPCPPPPSPPPSPPPPQLP 95
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +3
Query: 474 HXAPV*RLT*PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
H P + P P P K + PPPP SPP SP PP
Sbjct: 40 HYTPPVKHYSPPPVYHSPPPPKKHYEYKSPPPPVKHYSPPPVYHSPPPP 88
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 78 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 116
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 106 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 144
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 134 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 172
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 162 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 200
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 190 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 228
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 218 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 256
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 246 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 284
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 274 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 312
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 302 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 340
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 330 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 368
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPP---XSPXPP 611
P P P K + PPPP SPP SP PP
Sbjct: 358 PPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPP 396
>At1g11850.2 68414.m01364 expressed protein
Length = 108
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 639 GXXVSXRGNXGGXGTGXGMRXGXGGGVXGXSXDILMGG 526
G + G G G G G+ G GGG G L+GG
Sbjct: 56 GAGLGGLGIGAGIGAGAGLGLGGGGGGLGGGGGGLLGG 93
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*PXXLAXPTX*PXLDXLWXNXP 692
PPP S PP SP PP P L P P + ++ P
Sbjct: 56 PPPSCTPSPPPPSPPPPKKSSCPPSPLPPPPPPPPPNYVFTYPP 99
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 507 SPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*P 632
SP P Y PPPP S PP PP P Y P
Sbjct: 49 SPVTIPPPPPVYSRPVAFPPPPPIYSPPPPPIYPP--PIYSP 88
>At4g39260.2 68417.m05558 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 126
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 627 SXRGNXGGXGTGXGMRXGXGGGVXGXSXDILMGG 526
S G G G+G G R G GGG G GG
Sbjct: 87 SGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGG 120
>At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 169
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 627 SXRGNXGGXGTGXGMRXGXGGGVXGXSXDILMGG 526
S G G G+G G R G GGG G GG
Sbjct: 87 SGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGG 120
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFP 620
PPPP S PP + PP P
Sbjct: 70 PPPPQSTSPPPVATTPPALP 89
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 546 LTXRXPPPPXXXSSPPXSPXPP 611
L + PPPP +PP P PP
Sbjct: 320 LLQQPPPPPSVSKAPPPPPPPP 341
>At4g08370.1 68417.m01382 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 350
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPP 611
PSP P L PPPP +SPP P PP
Sbjct: 47 PSPYVYKSPPPSPYLYSSPPPPPYVYNSPP--PPPP 80
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 561 PPPPXXXSSPPXSPXPPXFPXY*P 632
PPPP PP PP P Y P
Sbjct: 788 PPPPVHSPPPPVHSPPPPSPIYSP 811
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 504 PSPTXXXXRPLKYXLTXRXPPPPXXXSSPPXSPXPPXFPXY*P 632
P P P PPPP PP PP P Y P
Sbjct: 576 PPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSP 618
>At1g02710.1 68414.m00222 glycine-rich protein
Length = 96
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 648 GXPGXXVSXRGNXGGXGTGXGMRXGXGGGVXGXSXD 541
G G +S G GG G+G G R GGG G D
Sbjct: 59 GGGGQKISKGG--GGGGSGGGQRSSSGGGGGGGEGD 92
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,233,098
Number of Sequences: 28952
Number of extensions: 349583
Number of successful extensions: 4474
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3593
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2295205728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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