Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_H23
(881 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 173 7e-42
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 166 6e-40
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 165 1e-39
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 156 8e-37
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 150 4e-35
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 135 1e-30
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 125 1e-27
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 124 4e-27
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 111 2e-23
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 109 7e-23
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 105 1e-21
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 105 2e-21
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 104 3e-21
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 99 7e-20
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 95 2e-18
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 94 4e-18
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 59 7e-18
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 93 1e-17
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 87 4e-16
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 75 3e-12
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 74 6e-12
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 55 3e-06
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 52 3e-05
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 48 4e-04
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 48 4e-04
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 40 0.084
UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 39 0.19
UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2; Ostr... 38 0.45
UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15... 33 7.3
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 173 bits (420), Expect = 7e-42
Identities = 76/113 (67%), Positives = 93/113 (82%)
Frame = +2
Query: 209 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 388
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + FY GK CVYVY+A+ + +P
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105
Query: 389 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
P +KT++RA+WGKVTR HGN+G+VRA+F NLP AMGHRIR+MLYPSRI
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 166 bits (404), Expect = 6e-40
Identities = 76/113 (67%), Positives = 88/113 (77%)
Frame = +2
Query: 209 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 388
R GRLY KA FTGY+RGLRNQHE+TALL+++G +R FY GK CVYVYRA+K+ P
Sbjct: 18 RPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEKKKVFP 77
Query: 389 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
R K TK+R IWGK+ RPHGNSG VRA+FK NLPA AMG RIRVMLYPSR+
Sbjct: 78 --RRQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKRIRVMLYPSRV 128
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 165 bits (402), Expect = 1e-39
Identities = 77/111 (69%), Positives = 88/111 (79%)
Frame = +2
Query: 215 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 394
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PGG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 395 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 63 ---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 156 bits (378), Expect = 8e-37
Identities = 72/118 (61%), Positives = 89/118 (75%)
Frame = +2
Query: 194 KASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKK 373
K + RHGRLYA+A+FTG+KRG RNQH NT+LL +E + DA FY GK CV++Y+AK
Sbjct: 57 KRLRLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKT 116
Query: 374 RTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
+ P R K++LRAIWGKVTRPHG+SGSVRAKF NLPA MG ++R+MLYPS I
Sbjct: 117 KELKPHSKR--KSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 172
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 150 bits (364), Expect = 4e-35
Identities = 71/121 (58%), Positives = 89/121 (73%)
Frame = +2
Query: 185 VLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYR 364
V R+ S P GRLY KA+FTG+KRGLR Q E+T+LLK+EG ++ DA FYAGK VY+Y+
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYK 65
Query: 365 AKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSR 544
A +T G T+ RAIWGK+TRPHGN+G+VRAKF N+P A+G RIRV+LYPS
Sbjct: 66 AHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSN 123
Query: 545 I 547
I
Sbjct: 124 I 124
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 135 bits (327), Expect = 1e-30
Identities = 62/97 (63%), Positives = 75/97 (77%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
RL+ KAVFTGY RGLRNQHE+TALL++EG ++ D FY GK C YVY+AK++T P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKT---P 60
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 508
RG+ K R IWGKVTR HGNSG VRA FK+NLPA+A+
Sbjct: 61 RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 125 bits (302), Expect = 1e-27
Identities = 56/110 (50%), Positives = 75/110 (68%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
RLY + GYKR NQ+E T+L+++EG + D +YAGK Y+Y+AK ++
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS------ 64
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
+T+ R IWGKVTRPHGNSG VRAKFKSNLP ++MG ++RV +YPS I
Sbjct: 65 --SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI 112
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 124 bits (298), Expect = 4e-27
Identities = 59/88 (67%), Positives = 66/88 (75%)
Frame = +2
Query: 284 ALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG 463
ALLK+EG R++ FY GK C YVY+AK T PGG K K R IWGKVTR HGNS
Sbjct: 2 ALLKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSS 58
Query: 464 SVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 59 MVRAKFRSNLPAKAIGHRIRVMLYPSRI 86
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 111 bits (267), Expect = 2e-23
Identities = 55/113 (48%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAK--KRTPIPG 391
RLY K GY RGL Q + TAL++VE R DA +Y GK YVY K KR
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKRCVRWS 91
Query: 392 GPRGKKTKLRAIWGKVTRPHGNSGSVRAKFK-SNLPAQAMGHRIRVMLYPSRI 547
+++ RA+WG+VTRPHGN+G +R KF +++PA A+G RIRV LYPS+I
Sbjct: 92 KAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIGRRIRVYLYPSQI 144
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 109 bits (263), Expect = 7e-23
Identities = 53/110 (48%), Positives = 69/110 (62%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
RLY + + GYKR NQ+ +T+L+K+EG D FY GK YVY+AK +
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFYGGKKLCYVYKAKTKK------ 61
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
+ T R IWGKV R HG SG VRAKFKS+LP+ ++G ++R MLYPS I
Sbjct: 62 --QGTAYRTIWGKVMRAHGTSGVVRAKFKSHLPSNSIGGKVRCMLYPSNI 109
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 105 bits (253), Expect = 1e-21
Identities = 53/110 (48%), Positives = 67/110 (60%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
RLY K Y+R R + N +L+K+EG +A FY GK YVYRA K
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEV------ 59
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
RG +K+R +WGKVTR HGNSG VRA F++NLPA+ G +R+ LYPS I
Sbjct: 60 RG--SKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 105 bits (251), Expect = 2e-21
Identities = 49/110 (44%), Positives = 64/110 (58%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
RLY K V GYKR RNQ N L+ + + A FY GK YVYR K
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFYVGKKIAYVYRTNKHHD----- 99
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
K++ IWGKV R HGNSG +RA+F++N+P +A G R+R+++YPS I
Sbjct: 100 ---GVKIKCIWGKVCRTHGNSGVIRARFRTNIPPKAFGDRVRILMYPSNI 146
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 104 bits (249), Expect = 3e-21
Identities = 50/110 (45%), Positives = 72/110 (65%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
RLY K G+KRG RN N +LL++EG ++ A Y GK YVY+AK+ I G
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKRE--ING-- 132
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
+++R IWG+++R HGNSG+V++KF++NLPA+ G R+ML+PS I
Sbjct: 133 ----SRVRVIWGRISRSHGNSGAVKSKFRTNLPAKTFGASCRIMLFPSNI 178
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 99 bits (238), Expect = 7e-20
Identities = 49/109 (44%), Positives = 68/109 (62%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
RL+ KAVFTG++R Q+EN ALLK+E D + FY GK Y+Y+A
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFYWGKRVAYIYKAHSLK------ 81
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSR 544
TK RAIWG++++ HG++G V A+F NLP +A+G +RV LYP+R
Sbjct: 82 --NNTKFRAIWGRISKSHGSNGVVTARFGRNLPPRAIGSTLRVFLYPNR 128
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 95.1 bits (226), Expect = 2e-18
Identities = 47/110 (42%), Positives = 64/110 (58%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
++Y+K V GY+R Q+ N +L+K+EG R D+ FY GK V + K P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAK---NP 59
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
G K WGK+ + HG+SG V+A+F NLP +AMG +RVMLYPS I
Sbjct: 60 TGHKIS----WGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 94.3 bits (224), Expect = 4e-18
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = +2
Query: 254 RGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 433
R NQ+E T+L+++EG + D +YAGK Y+Y+AK ++ +T+ R IWG
Sbjct: 43 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWG 94
Query: 434 KVTRPHGNSGSVRAKFKSNLPAQAM 508
KVTRPHGNSG VRAKFKSNLP ++M
Sbjct: 95 KVTRPHGNSGVVRAKFKSNLPPESM 119
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 59.3 bits (137), Expect(2) = 7e-18
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +2
Query: 443 RPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
+ HGNSG VRAKF+SNLPA+A+GH I+VMLYPS I
Sbjct: 46 KAHGNSGMVRAKFQSNLPAKAIGHGIQVMLYPSSI 80
Score = 54.8 bits (126), Expect(2) = 7e-18
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +2
Query: 215 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGK 343
GRL++KAVF GYKRG RNQ E+TALLK+E ++ FY K
Sbjct: 3 GRLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFYLDK 45
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 92.7 bits (220), Expect = 1e-17
Identities = 46/99 (46%), Positives = 63/99 (63%)
Frame = +2
Query: 251 KRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIW 430
++G+ + +L+K++G A FY GK +VYRAK+ RG + +R IW
Sbjct: 29 RQGIWEADTSYSLIKIDGVDSTEAANFYLGKKVAFVYRAKREV------RG--SNIRVIW 80
Query: 431 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
GKVTRPHGNSG VRA+F+ NLP ++ G +RVMLYPS I
Sbjct: 81 GKVTRPHGNSGVVRAQFRHNLPPKSFGATVRVMLYPSNI 119
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 87.4 bits (207), Expect = 4e-16
Identities = 46/110 (41%), Positives = 64/110 (58%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
+L+ A F ++R R N ALL+++G + +A FYAGK V++ K+ I
Sbjct: 6 KLFVPATFVSFRRSKRIIKPNQALLEIQGVVSKEEAQFYAGKKVASVWKFDKQEFIN--- 62
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
WG +T+PHGNSG VRAKF+ NLP Q +G ++RVMLYPS I
Sbjct: 63 ----------WGVITQPHGNSGVVRAKFEKNLPPQMLGKQVRVMLYPSTI 102
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/104 (39%), Positives = 57/104 (54%)
Frame = +2
Query: 215 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 394
G+ + A+F GY+R Q EN AL+KV G R + G+ + + +K PI
Sbjct: 6 GKTFLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGR-LIAIIHSKSGKPI--- 61
Query: 395 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRV 526
+GK+ RPHGNSG VRA+F +NLP Q MGH++RV
Sbjct: 62 -----------FGKICRPHGNSGMVRARFYTNLPGQLMGHKVRV 94
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 73.7 bits (173), Expect = 6e-12
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Frame = +2
Query: 212 HG-RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 388
HG RLY K Y+RG R + NT+L+K+EG +D A FY GK +VYRAK+
Sbjct: 5 HGHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREV--- 61
Query: 389 GGPRGKKTKLRAIWGKVTRPHGNSG----SVRAKFKSNLPA 499
+ +K+R IWGKVTR HG G +++ +F S P+
Sbjct: 62 -----QGSKIRVIWGKVTRTHGQLGRCPCAIQTQFFSQSPS 97
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 54.8 bits (126), Expect = 3e-06
Identities = 33/101 (32%), Positives = 47/101 (46%)
Frame = +2
Query: 233 AVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKT 412
A F +KRG R H LLK+ +++A Y G V + + P
Sbjct: 18 ATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYP-------- 69
Query: 413 KLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 535
+ G +TR HGNSG+VRA+F NL + +G + V LY
Sbjct: 70 ----VHGVITRIHGNSGAVRARFTRNLDPKLLGTHVFVKLY 106
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 51.6 bits (118), Expect = 3e-05
Identities = 31/100 (31%), Positives = 46/100 (46%)
Frame = +2
Query: 230 KAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 409
K V Y+R NQH N ++K R +A G+ ++ P GK
Sbjct: 4 KGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIWK-----------SPSGKL 52
Query: 410 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 529
K GK+ R HG G+VRA+F+ LP QA+G + ++
Sbjct: 53 LK-----GKIVRVHGTKGAVRARFEKGLPGQALGDYVEII 87
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 47.6 bits (108), Expect = 4e-04
Identities = 37/110 (33%), Positives = 49/110 (44%)
Frame = +2
Query: 218 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 397
R+Y + GY+ G Q+E L++V+G DR A G +Y
Sbjct: 7 RVYT-GIILGYRLGSNTQYEKQVLIRVDGVNDRASASRLIGWKVLY-------------R 52
Query: 398 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 547
GK + R GK+ HG+ G V A FK NLP QA G V +YP I
Sbjct: 53 DGKGNEYR---GKIVHVHGSKGVVIAVFKPNLPGQARGG--NVYIYPKGI 97
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/97 (28%), Positives = 46/97 (47%)
Frame = +2
Query: 230 KAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 409
+ V Y+ G Q +++ EG + R++A GK ++ + P G
Sbjct: 6 RGVIVNYRMGRHTQDPRQCIIEFEGVESRSEAAQLIGKEVIWKH------PETG------ 53
Query: 410 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 520
+ I GKV HGN+G+VR +F+ LP QA+G +
Sbjct: 54 ---KVIRGKVVDTHGNNGAVRVRFERGLPGQALGTEV 87
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 39.9 bits (89), Expect = 0.084
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 215 GRLYAKAVFTGYKR--GLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 388
GR KAV G+ G+R+ + + EG R++ + K C YVY+AK P
Sbjct: 22 GRYTRKAVVQGHFSWLGVRSLKPKSTD-RAEGVYARDETELHLAKRCAYVYKAKISAVTP 80
Query: 389 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKF 481
G GK K R + GK P +G AKF
Sbjct: 81 G---GKTNKTRVVRGKQLGP--RNGLFCAKF 106
>UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 225
Score = 39.5 bits (88), Expect = 0.11
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = -2
Query: 508 HSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIK 329
H LGR++ LELGSD V + +G LAP +T++ L V + LA+I
Sbjct: 60 HGLGRQIGLELGSDNTTVTVRSGDLAPXATKVRSVLLH--------LGLVDVRHSLAAIP 111
Query: 328 DCIITVFCSFNLEESGVLVLV 266
++ +F+L++ GV +LV
Sbjct: 112 RHLLLGVHAFDLDQRGVGILV 132
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L35Ae - Thermofilum
pendens (strain Hrk 5)
Length = 85
Score = 38.7 bits (86), Expect = 0.19
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 431 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 529
GK+ R HG G V A FK +LP QA+G +++++
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVGTKVKIV 85
>UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2;
Ostreococcus|Rep: Phytoene/squalene synthetase -
Ostreococcus tauri
Length = 437
Score = 37.5 bits (83), Expect = 0.45
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -2
Query: 541 GRIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 416
GR++H S+ + +GR+V LELG A + HLAPD ++
Sbjct: 335 GRVKHASHLTADRVGRQVLLELGPHDAARPVRPSHLAPDRSE 376
>UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15;
Staphylococcus|Rep: Cassette chromosome recombinase C -
Staphylococcus aureus
Length = 559
Score = 33.5 bits (73), Expect = 7.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 236 VFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKH 346
V+ GY R N H+N A+ + G D+ND + GKH
Sbjct: 233 VYKGYVRF--NNHQNWAVQRRSGKSDKNDVILVKGKH 267
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,969,252
Number of Sequences: 1657284
Number of extensions: 12769233
Number of successful extensions: 30532
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30507
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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