Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H22
         (864 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 375 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 265
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 375 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 265
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 466 QTRRNPEWRMRTT 428
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 435 EQLLLEGGVPGIAD 394
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 673 RTVGCNTHQSLHHYEGEVFQTFDS 602
           + V  +T ++ H Y+G+ +  FDS
Sbjct: 312 KVVWDDTQKNTHMYKGDQWVAFDS 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,679
Number of Sequences: 336
Number of extensions: 4428
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)