Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H21
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785...    71   2e-12
10_06_0110 + 10889414-10889669,10889756-10889806,10890595-108911...    30   2.1  
12_02_0515 - 19920411-19921694                                         29   3.7  
11_03_0068 + 9564354-9565180,9566658-9568704                           29   3.7  
03_06_0568 - 34778408-34778710,34779340-34779411,34779549-347796...    29   6.4  

>04_04_1250 +
           32077590-32078000,32078132-32078308,32078437-32078561,
           32078629-32078761,32078866-32079015,32079105-32079158,
           32079437-32079532,32080021-32080095,32080723-32080824,
           32080903-32081589,32081686-32081817,32081916-32082023,
           32082170-32082319
          Length = 799

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
 Frame = +2

Query: 338 IKRDPESYKEEFHQQLAHFETTLEIFNLNPT-----------QYSKKLDEQAMFLAQVAQ 484
           +KRDPE Y+EE  Q   HFE+++ +F                + +K+L + A+FLA VA 
Sbjct: 35  MKRDPEGYEEELRQLRRHFESSVFLFRQQAALASTSSSGGGGEVAKELGDLALFLAHVAP 94

Query: 485 CYFNEMKTFPQKIVDVLKTHNTTLHNEMRLALCKCLILLRNKNFITPFDLLELFFTLLKC 664
            Y +++   P +I  +L T+   L + +R+ L + LILL N+  +   D +ELF  L   
Sbjct: 95  FYPDDLADLPDQIGGLLDTNARALPSGLRVHLVQALILLVNRKIVDLEDTMELFMELQVI 154

Query: 665 QDKYLRDFLKTHIITDI 715
            D+ ++    +HI+  I
Sbjct: 155 GDRAVKKLAFSHIVHSI 171


>10_06_0110 +
           10889414-10889669,10889756-10889806,10890595-10891163,
           10891178-10891660,10891747-10891944,10893300-10893354,
           10893372-10893631
          Length = 623

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 307 SEQPNAVAKSYKT*SRILQRRVSSTTCTF*DHFRNIQLE 423
           SE  +  +K+YK  S +L R     TC+  +H R++ LE
Sbjct: 247 SEMLSLFSKAYKIASHLLSRTADRLTCSAVEHLRHLLLE 285


>12_02_0515 - 19920411-19921694
          Length = 427

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
 Frame = +2

Query: 521 IVDVLKTHNTTLHNEMR------LALCKCLILLRNKNFITPFDLLELFFTLL 658
           +VDV K H TT+ N +        +L + L++LR K+F  P+    L   L+
Sbjct: 357 LVDVTKHHYTTMFNNVNRYCRNPFSLGRHLVILRRKHFSNPWTFFSLVGALM 408


>11_03_0068 + 9564354-9565180,9566658-9568704
          Length = 957

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
 Frame = +2

Query: 467 LAQVAQCYFNEM----KTFPQKIVDVLKTHNTTLHNE-MRLALCKCLILLRNKNFITPFD 631
           L +V +CYFNE+       P +I    + H   +H+  + L + K ++    +NFIT F 
Sbjct: 468 LEEVGECYFNELINRSMIQPDEIQYDGQAHACRMHDMILDLIISKSVV----ENFITSFS 523

Query: 632 LLELFFTLLKCQDKYLR 682
                  LL CQDK +R
Sbjct: 524 ----HNYLLGCQDKVIR 536


>03_06_0568 -
           34778408-34778710,34779340-34779411,34779549-34779635,
           34779722-34779880,34780641-34780739,34780823-34780903,
           34781007-34781461,34781550-34781679,34781952-34782743
          Length = 725

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 216 LKQQKSKYLVP-VCSYYCTKIFXKWLGIIINFRTT*RSCKIL*NVIQN 356
           LK ++   LV  + S YC K +  WLG++++   +  S  +L  +++N
Sbjct: 313 LKHERFALLVTCLYSMYCAKNYVGWLGLLLSLNLSFISSDVLVQLLKN 360


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,371,931
Number of Sequences: 37544
Number of extensions: 317501
Number of successful extensions: 503
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)