Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H21
         (869 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_33427| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_3169| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.9  
SB_51334| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.5  

>SB_33427| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 786

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 757 TLQNFILACYKIPTPELXNSLLTYLVELYPQNIW 858
           TLQNF+    K          L  L+ELY +N+W
Sbjct: 328 TLQNFMYTMLKDSNAVAAKKSLDVLIELYKRNVW 361


>SB_3169| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1096

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +2

Query: 395 ETTLEIFNLNPTQYSKKLDEQAMFLAQVAQCYFNEMKTFPQKIVD 529
           ++ L + +L  T+Y  K     ++L     C+ ++MK+ PQ I +
Sbjct: 390 DSFLRVTHLTRTRYEDKFVFVKLYLLFHLMCFIHDMKSLPQSITE 434


>SB_51334| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1402

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 515  QKIVDVLKTHNTTLHNEMRLALCKCLILLRNKNFITPFDLLE 640
            Q+ V    +HN TL  E+ + LC+ L+L    +F    +LL+
Sbjct: 1198 QEYVSEGSSHNCTLSREVGVTLCEALVLADKGDFPGAVELLK 1239


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,813,253
Number of Sequences: 59808
Number of extensions: 421526
Number of successful extensions: 744
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)