Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H18
         (989 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces cap...    36   1.2  
UniRef50_A0GWT4 Cluster: Putative uncharacterized protein; n=2; ...    35   3.7  
UniRef50_Q0V5U2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  
UniRef50_Q9FPQ6 Cluster: Vegetative cell wall protein gp1 precur...    33   8.6  

>UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 757

 Score = 36.3 bits (80), Expect = 1.2
 Identities = 24/82 (29%), Positives = 27/82 (32%)
 Frame = -2

Query: 670 GXGSXXXXGGQXGXGXXGKGXSXXXPXXEXXGPXGWPXGXXXGXMXEPRXGXGKPELPAG 491
           G G     GG    G  G+G     P     G  G P G   G    P  G G P    G
Sbjct: 359 GGGGGPPEGGGGSDGAPGRGGGGGGPPGGGGGGGGPPGGGGGGGGGPPGGGGGGPPGSGG 418

Query: 490 GVXGYRXPAXXXPGAXXSVKRG 425
           G  G   P     G+  +  RG
Sbjct: 419 GGGGGGGPPEGGGGSDGAPGRG 440


>UniRef50_A0GWT4 Cluster: Putative uncharacterized protein; n=2;
           Chloroflexus|Rep: Putative uncharacterized protein -
           Chloroflexus aggregans DSM 9485
          Length = 600

 Score = 34.7 bits (76), Expect = 3.7
 Identities = 18/56 (32%), Positives = 19/56 (33%)
 Frame = +1

Query: 619 PXAPXPPGPXXXXXTPXLXXXPXPPPXXXIFXESXXPFXPSLXAXFXXRPXPXPGS 786
           P AP PP P      P     P PPP          P  P+       RP P P S
Sbjct: 511 PHAPAPPPPPHAPAPPPPPHAPAPPPPPHAPAPPPPPHAPATGQTIQLRPSPTPPS 566


>UniRef50_Q0V5U2 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 407

 Score = 33.5 bits (73), Expect = 8.6
 Identities = 18/60 (30%), Positives = 23/60 (38%)
 Frame = -2

Query: 562 PXGXXXGXMXEPRXGXGKPELPAGGVXGYRXPAXXXPGAXXSVKRGXRKSAPNPNPLSPG 383
           P G       +P    G+P  PAG       P+   P A          SAP+P P +PG
Sbjct: 225 PAGQPSPPAGQPSPPAGQPSSPAGQPSASAPPSQPTPPAGGQSSAAAPPSAPSPPPSNPG 284


>UniRef50_Q9FPQ6 Cluster: Vegetative cell wall protein gp1
           precursor; n=14; root|Rep: Vegetative cell wall protein
           gp1 precursor - Chlamydomonas reinhardtii
          Length = 555

 Score = 33.5 bits (73), Expect = 8.6
 Identities = 20/69 (28%), Positives = 22/69 (31%)
 Frame = +1

Query: 598 PXXLXLCPXAPXPPGPXXXXXTPXLXXXPXPPPXXXIFXESXXPFXPSLXAXFXXRPXPX 777
           P  +  CP +P PP P      P     P P P          P  PS        P P 
Sbjct: 33  PGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPA 92

Query: 778 PGSRFXLSP 804
           P S    SP
Sbjct: 93  PPSPAPPSP 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,455,453
Number of Sequences: 1657284
Number of extensions: 6554973
Number of successful extensions: 17287
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15095
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 93081302556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)