Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H17
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.     33   1.3  
AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease ...    33   1.3  
AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic se...    33   1.3  
AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens ...    32   2.3  
M99701-1|AAA60149.1|  157|Homo sapiens pp21 protein.                   31   4.1  
AF095906-1|AAD17840.1|  157|Homo sapiens transcription elongatio...    31   4.1  

>BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.
          Length = 562

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -1

Query: 396 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 229
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 228 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 136
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease
           serine 6 protein.
          Length = 558

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -1

Query: 396 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 229
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 228 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 136
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic
           serine protease protein.
          Length = 581

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -1

Query: 396 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 229
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 228 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 136
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
           TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
          Length = 491

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
 Frame = -1

Query: 393 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVR 226
           TP     PG   P + SP   + +RASPA A+LS   S +S+   + S   S      VR
Sbjct: 64  TPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVR 123

Query: 225 GTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 136
            T   A  + S      PA    R   GT LP
Sbjct: 124 ATPVGAVPIRSSPARSAPATRATRESPGTSLP 155


>M99701-1|AAA60149.1|  157|Homo sapiens pp21 protein.
          Length = 157

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 394 RRQGQLVPQ*QPRPERQGVRDQELSQRHPQRAQLQHAGRR 513
           R++ +  PQ +PRP R+G+R   L +  P R+ L+ +  R
Sbjct: 5   RKENEEEPQSRPRPMRRGLRWSTLPKSSPPRSSLRRSSPR 44


>AF095906-1|AAD17840.1|  157|Homo sapiens transcription elongation
           factor A SII-like 1 protein.
          Length = 157

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 394 RRQGQLVPQ*QPRPERQGVRDQELSQRHPQRAQLQHAGRR 513
           R++ +  PQ +PRP R+G+R   L +  P R+ L+ +  R
Sbjct: 5   RKENEEEPQSRPRPMRRGLRWSTLPKSSPPRSSLRRSSPR 44


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,751,087
Number of Sequences: 237096
Number of extensions: 2172054
Number of successful extensions: 20332
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20306
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)