Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H15
         (981 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    43   0.014
UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.69 
UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1; ...    31   2.0  
UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces cap...    35   3.7  

>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 42.7 bits (96), Expect = 0.014
 Identities = 37/104 (35%), Positives = 39/104 (37%), Gaps = 21/104 (20%)
 Frame = -1

Query: 600 PPPPPX--PQKKXXXGGGXKKXXFFFFXXXGGXG-------XXXXXXXFFFFXXXXXP-- 454
           PPPPP    +KK   GGG     FFFF   G  G              FFFF     P  
Sbjct: 8   PPPPPKKKKKKKGRGGGGAHPHLFFFFLGGGREGGGGAPPPPPARRQKFFFFPHFFFPPP 67

Query: 453 --XGGGG--------GXXPPXGXFXXKKXXXKXFFPPPPPXXFF 352
              GGGG        G  PP      KK     FF PPPP  F+
Sbjct: 68  PRRGGGGVFFYKKKRGGPPPPPTTQKKK---NFFFSPPPPPSFW 108



 Score = 41.1 bits (92), Expect = 0.042
 Identities = 24/67 (35%), Positives = 27/67 (40%)
 Frame = +3

Query: 507 PXPPXPKKKKXXFFXXPPXXXFFFGGXGGGGXXXXXXXPGXXXXXXXGGXXXFFFFVXXX 686
           P PP  +KKK  FF  PP   F+    GGGG        G       G     FF+    
Sbjct: 86  PPPPTTQKKKNFFFSPPPPPSFWGXFFGGGGGFVXXPPRGGAPPPPGGAPPPLFFWGGKR 145

Query: 687 KXXXPPP 707
               PPP
Sbjct: 146 GKKTPPP 152



 Score = 38.3 bits (85), Expect = 0.30
 Identities = 23/67 (34%), Positives = 26/67 (38%)
 Frame = +3

Query: 507 PXPPXPKKKKXXFFXXPPXXXFFFGGXGGGGXXXXXXXPGXXXXXXXGGXXXFFFFVXXX 686
           P PP   +KK  FF  PP    F+G   GGG       P        GG     FF    
Sbjct: 85  PPPPPTTQKKKNFFFSPPPPPSFWGXFFGGGGGFVXXPPRGGAPPPPGGAPPPLFFWGGK 144

Query: 687 KXXXPPP 707
           +    PP
Sbjct: 145 RGKKTPP 151


>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 37.1 bits (82), Expect = 0.69
 Identities = 34/88 (38%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
 Frame = -1

Query: 597 PPPPXPQKKXXXGGGXKKXXFFFFXXXGGXGXXXXXXX----------FFF--FXXXXXP 454
           PPPP P KK       KK  FFFF   GG G                 FFF  F      
Sbjct: 67  PPPPPPLKKK------KKIFFFFFKKRGGGGGFFFFFPPPQQNPPPFFFFFLGFFLFFFK 120

Query: 453 XGGGGGXXPPXGXFXXKKXXXKXFFPPP 370
             GGGG  PP      KK   K FFPPP
Sbjct: 121 KRGGGGFSPP----PPKK--KKIFFPPP 142


>UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 272

 Score = 31.1 bits (67), Expect(2) = 2.0
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 600 PPPPPXPQKKXXXGGG 553
           PPPPP P+KK   GGG
Sbjct: 185 PPPPPPPKKKKRGGGG 200



 Score = 23.4 bits (48), Expect(2) = 2.0
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
 Frame = -1

Query: 450 GGGGGXXPPXGXFXXKKXXXKXF--FPPP 370
           GGGGG  PP      KK     F  FP P
Sbjct: 197 GGGGGGAPPPQKKKKKKKKIFSFSLFPTP 225


>UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 757

 Score = 34.7 bits (76), Expect = 3.7
 Identities = 19/53 (35%), Positives = 19/53 (35%)
 Frame = -3

Query: 457 PXGGGGGGXPPXGXFFXKKXXXKXXXXXXXXXXXXXXGGXFPPXRGGGXPGXP 299
           P GGGGGG PP G                        GG  PP  GGG  G P
Sbjct: 385 PGGGGGGGGPPGGGGGGGGGPPGGGGGGPPGSGGGGGGGGGPPEGGGGSDGAP 437


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,745,560
Number of Sequences: 1657284
Number of extensions: 9968743
Number of successful extensions: 95703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54586
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 91856548575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)