Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H14
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   4.1  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   5.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   9.5  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol
          oxidase subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 27 GNSLRFDCNSNFLRKRTSPIAMK 95
          GN   FD  +NFL +R  PI ++
Sbjct: 23 GNKEVFDVPNNFLPERYKPIGVQ 45


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 763 PTPGGKGRXWVLGPSSG 813
           P   GKG  W L P SG
Sbjct: 205 PDKPGKGSFWSLHPDSG 221


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -3

Query: 184 DVPKELDISPTRKWYE*TQTHKDRQRSTRDFIAIGDVRFRRKFELQSNL 38
           D P  +  + T+  Y    T   R    ++F     +  RRK EL ++L
Sbjct: 145 DAPDAIGKTRTKDKYRVVYTDHQRVELEKEFYYSRYITIRRKAELANSL 193


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 775 GKGRXWVLGPSS 810
           GKG  W+L PS+
Sbjct: 152 GKGNYWMLDPSA 163


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 184 HKLVQYNAIPFMKRVK 231
           HK   Y+AIP+++ V+
Sbjct: 92  HKCYDYDAIPWLQNVE 107


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +2

Query: 62  PPKAHVSYRNEISRAPLSVLVRLCSLVPFSCRRYIQFL 175
           P K  +  +  ++ AP    V + +     C+R IQF+
Sbjct: 39  PTKTVIQSKRPLAPAPERTSVLVTNNSDLRCKRKIQFM 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,934
Number of Sequences: 336
Number of extensions: 3597
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)