Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H14
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0703 + 22282219-22282430,22286054-22287620,22287751-222883...    29   3.6  
09_04_0543 - 18442571-18443111,18443232-18443426,18443507-184440...    29   6.3  
04_04_0940 - 29539138-29539626,29540125-29540531,29540631-295406...    29   6.3  

>12_02_0703 +
           22282219-22282430,22286054-22287620,22287751-22288371,
           22288434-22288484
          Length = 816

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -1

Query: 408 DVYSDVVAQAGSAFTLHAHIHVRVADTARSNVHGRLTVERVQRLDTCNNFIIGTAVEVV 232
           D +SD+VA +         +  +  D  RSN     TVE++   D CN  +   A++++
Sbjct: 416 DAWSDIVAASLQLLFRLVALPGKAGDKLRSNKRAINTVEKILGCDECNEKLHVLAIKIL 474


>09_04_0543 -
           18442571-18443111,18443232-18443426,18443507-18444045,
           18444205-18444375,18444794-18445219
          Length = 623

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 414 LVDVYSDVVAQ-AGSAFTLHAHI-HVRVADTARSNVHGRLTVERVQR 280
           LVD+  +V +Q A  AF   A + H  V+ T RSN HG L   R  R
Sbjct: 51  LVDLSKEVPSQFARPAFQRDASLDHSLVSPTQRSNSHGGLAERRAAR 97


>04_04_0940 -
           29539138-29539626,29540125-29540531,29540631-29540662,
           29540809-29541086,29541164-29542515,29542616-29542874
          Length = 938

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 21/50 (42%), Positives = 23/50 (46%)
 Frame = +1

Query: 121 CASVFTRTIFLSAIYPVPWAHHKLVQYNAIPFMKRVKNYFYSSADNKIIT 270
           C  VF   I L A YPVP        Y  +PF    +N  YS   NKIIT
Sbjct: 496 CIDVFVAAINLLA-YPVP--------YRFVPFGNNRENPSYSELINKIIT 536


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,197,800
Number of Sequences: 37544
Number of extensions: 458285
Number of successful extensions: 1046
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)