Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_H14
(861 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX511262-23|CAM45814.1| 188|Homo sapiens apolipoprotein M protein. 31 7.1
BC020683-1|AAH20683.1| 188|Homo sapiens apolipoprotein M protein. 31 7.1
BA000025-29|BAB63389.1| 188|Homo sapiens Apolipoprotein M protein. 31 7.1
AL805934-25|CAI18511.1| 188|Homo sapiens apolipoprotein M protein. 31 7.1
AL670886-16|CAI17788.1| 188|Homo sapiens apolipoprotein M protein. 31 7.1
AL662801-68|CAI18319.1| 188|Homo sapiens apolipoprotein M protein. 31 7.1
AJ245434-1|CAB51604.1| 177|Homo sapiens G3a protein protein. 31 7.1
AF129756-15|AAD18084.1| 188|Homo sapiens Apo M protein. 31 7.1
AF118393-1|AAD11443.2| 188|Homo sapiens apolipoprotein M protein. 31 7.1
>BX511262-23|CAM45814.1| 188|Homo sapiens apolipoprotein M protein.
Length = 188
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
>BC020683-1|AAH20683.1| 188|Homo sapiens apolipoprotein M protein.
Length = 188
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
>BA000025-29|BAB63389.1| 188|Homo sapiens Apolipoprotein M protein.
Length = 188
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
>AL805934-25|CAI18511.1| 188|Homo sapiens apolipoprotein M protein.
Length = 188
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
>AL670886-16|CAI17788.1| 188|Homo sapiens apolipoprotein M protein.
Length = 188
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
>AL662801-68|CAI18319.1| 188|Homo sapiens apolipoprotein M protein.
Length = 188
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
>AJ245434-1|CAB51604.1| 177|Homo sapiens G3a protein protein.
Length = 177
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
>AF129756-15|AAD18084.1| 188|Homo sapiens Apo M protein.
Length = 188
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
>AF118393-1|AAD11443.2| 188|Homo sapiens apolipoprotein M protein.
Length = 188
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = -1
Query: 300 TVERVQRLDTCNNFIIGTAVEVVLHTLHERYRVVLDQLVMCPRNWIYRRQENGTSEHRRT 121
T E + D +N + A LH R + + + PR WIY E T
Sbjct: 56 TKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIYHLTEGSTDLRTEG 115
Query: 120 RTD 112
R D
Sbjct: 116 RPD 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,472,198
Number of Sequences: 237096
Number of extensions: 2518418
Number of successful extensions: 8273
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8263
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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