Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_H09
(879 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 57 5e-07
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 46 0.002
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 41 0.048
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 40 0.083
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 37 0.59
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 37 0.78
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 34 4.1
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 57.2 bits (132), Expect = 5e-07
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2
Query: 182 DDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
DDVAVT E + LKA V VEPYW LFA L G V+DLITN GS
Sbjct: 19 DDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGS 65
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 54.0 bits (124), Expect = 5e-06
Identities = 29/49 (59%), Positives = 31/49 (63%)
Frame = +2
Query: 176 MXDDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
+ DDVAVT E S LKA V EPYW LFA L G V+DLITN GS
Sbjct: 42 LVDDVAVTDEKISTILKAANV--EPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 45.6 bits (103), Expect = 0.002
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +2
Query: 182 DDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
DDVAVT E S ++A V +EPYW LF L G V+DLITN GS
Sbjct: 29 DDVAVTDEKIST-IQAN-VDIEPYWPGLFTKALEGINVKDLITNIGS 73
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 40.7 bits (91), Expect = 0.048
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2
Query: 236 VYVEPYWXILFAXXLXGXXVRDLITNXGS 322
V +EPYW LFA L G V+DLITN GS
Sbjct: 8 VDIEPYWPALFAKALEGINVKDLITNIGS 36
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 182 DDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
D+V VT + + +KA V VEP+W LFA L + LI N G+
Sbjct: 19 DEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGA 65
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 37.1 bits (82), Expect = 0.59
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 182 DDVAVTXEXXSXXLKAGXV-YVEPYWXILFAXXLXGXXVRDLITNXGS 322
DD+ VT + + LKA + +VE Y LFA L G V+DL+ + GS
Sbjct: 18 DDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLMSMGS 65
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 36.7 bits (81), Expect = 0.78
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 182 DDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
D + +T E S +K V VE YW LFA + DLI N G+
Sbjct: 18 DGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNVGA 64
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 34.3 bits (75), Expect = 4.1
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 182 DDVAVTXEXXSXXLKAGXV-YVEPYWXILFAXXLXGXXVRDLITNXGS 322
+ + +T + + A V +EP W LFA L G V+DL+ N GS
Sbjct: 18 EGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLLLNVGS 65
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 182 DDVAVTXEXXSXXL-KAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
D +T E L AG VEP W LFA L G V+D++T S
Sbjct: 19 DATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDILTEVAS 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,126,904
Number of Sequences: 1657284
Number of extensions: 1816401
Number of successful extensions: 1106
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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