Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H09
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    57   3e-08
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    57   3e-08
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    57   3e-08
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    55   1e-07

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 29/47 (61%), Positives = 31/47 (65%)
 Frame = +2

Query: 182 DDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
           DDVAVT E  +  LKA  V VEPYW  LFA  L G  V+DLITN GS
Sbjct: 19  DDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGS 65


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 29/47 (61%), Positives = 31/47 (65%)
 Frame = +2

Query: 182 DDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
           DDVAVT E  +  LKA  V VEPYW  LFA  L G  V+DLITN GS
Sbjct: 19  DDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGS 65


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 29/47 (61%), Positives = 31/47 (65%)
 Frame = +2

Query: 182 DDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
           DDVAVT E  +  LKA  V VEPYW  LFA  L G  V+DLITN GS
Sbjct: 19  DDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGS 65


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 30/47 (63%)
 Frame = +2

Query: 182 DDVAVTXEXXSXXLKAGXVYVEPYWXILFAXXLXGXXVRDLITNXGS 322
           DDVAVT E  +  LKA  V VEPYW  LFA  L    V+DLITN GS
Sbjct: 19  DDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGS 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,620,456
Number of Sequences: 53049
Number of extensions: 91894
Number of successful extensions: 51
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)