Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H04
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   1.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   7.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 104 FSLFSDSCTHIALLCWLINVFMGT 175
           F + S  C  I+ +C+L++  +GT
Sbjct: 34  FVIISPRCDKISAICFLLSTILGT 57


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 330  PMPFSQRSPGARGGRSPDTAYF 265
            P P     PG+ G +SP  A F
Sbjct: 1112 PPPSGSSGPGSTGSKSPPVAGF 1133


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 570 SEKNALFGE--ICDAIALFVTIISCNKQVNNNNCL 668
           S+ N L  E  +   + L V I  CN++  N++CL
Sbjct: 295 SKSNQLSREAKVTKTVLLGVKIDICNEEERNSHCL 329


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 750 PFPGGXXDSLMPEKTXPHLPXNLK 679
           PF G   DS++ E+    LP N K
Sbjct: 533 PFAGHPVDSVVWERDGRQLPINRK 556


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 776 SPXPPXGGXSPRVXSPGTQNXXP 844
           SP PP     P + +PG +   P
Sbjct: 237 SPHPPHLSSHPAIVTPGPKQELP 259


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 776 SPXPPXGGXSPRVXSPGTQNXXP 844
           SP PP     P + +PG +   P
Sbjct: 129 SPHPPHLSSHPAIVTPGPKQELP 151


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 727 FINARKNLPTPPPEP 683
           +++   N P PPP P
Sbjct: 723 YLSMENNAPPPPPPP 737


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,881
Number of Sequences: 336
Number of extensions: 3312
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)