Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_H04
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.4
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 29 5.6
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 29 5.6
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 29 5.6
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 29 5.6
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 29 5.6
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 29 5.6
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 29 5.6
Z81583-5|CAB04673.1| 574|Caenorhabditis elegans Hypothetical pr... 28 9.8
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -3
Query: 341 GAPRPCLFHSARPGPAEGGRPTPPTSSGTG 252
GAP P FH+ P P G P PP SS G
Sbjct: 349 GAPPPQQFHA--PSPQSFGGPPPPVSSAPG 376
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +1
Query: 166 YGHLTMNLVFWVFLSLVHSEVQQYTRRATPVPDEVGGVGRPPSAGPGRAL*KRHGR 333
+ + L W S HS +QQ+ RA G GRPP+ G K H R
Sbjct: 824 FSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGS-SGAGRPPTHQRGYPSQKLHRR 878
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +1
Query: 166 YGHLTMNLVFWVFLSLVHSEVQQYTRRATPVPDEVGGVGRPPSAGPGRAL*KRHGR 333
+ + L W S HS +QQ+ RA G GRPP+ G K H R
Sbjct: 850 FSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGS-SGAGRPPTHQRGYPSQKLHRR 904
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +1
Query: 166 YGHLTMNLVFWVFLSLVHSEVQQYTRRATPVPDEVGGVGRPPSAGPGRAL*KRHGR 333
+ + L W S HS +QQ+ RA G GRPP+ G K H R
Sbjct: 824 FSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGS-SGAGRPPTHQRGYPSQKLHRR 878
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +1
Query: 166 YGHLTMNLVFWVFLSLVHSEVQQYTRRATPVPDEVGGVGRPPSAGPGRAL*KRHGR 333
+ + L W S HS +QQ+ RA G GRPP+ G K H R
Sbjct: 850 FSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGS-SGAGRPPTHQRGYPSQKLHRR 904
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +1
Query: 166 YGHLTMNLVFWVFLSLVHSEVQQYTRRATPVPDEVGGVGRPPSAGPGRAL*KRHGR 333
+ + L W S HS +QQ+ RA G GRPP+ G K H R
Sbjct: 691 FSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGS-SGAGRPPTHQRGYPSQKLHRR 745
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +1
Query: 166 YGHLTMNLVFWVFLSLVHSEVQQYTRRATPVPDEVGGVGRPPSAGPGRAL*KRHGR 333
+ + L W S HS +QQ+ RA G GRPP+ G K H R
Sbjct: 824 FSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGS-SGAGRPPTHQRGYPSQKLHRR 878
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 928
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +1
Query: 166 YGHLTMNLVFWVFLSLVHSEVQQYTRRATPVPDEVGGVGRPPSAGPGRAL*KRHGR 333
+ + L W S HS +QQ+ RA G GRPP+ G K H R
Sbjct: 850 FSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGS-SGAGRPPTHQRGYPSQKLHRR 904
>Z81583-5|CAB04673.1| 574|Caenorhabditis elegans Hypothetical
protein T02G6.5 protein.
Length = 574
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 653 VNLFIAAYNGYK*SNSITNFTK*SIFFTAF*LWFVQT 543
+N F ++ GYK + + SIF+TAF F QT
Sbjct: 36 INFFSSSLTGYKGFKKLCKYILFSIFYTAFSNTFRQT 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,165,947
Number of Sequences: 27780
Number of extensions: 338328
Number of successful extensions: 939
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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