Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_H03
         (857 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g31560.2 68415.m03856 expressed protein                             31   0.74 
At2g31560.1 68415.m03855 expressed protein                             31   0.74 
At2g43340.1 68415.m05389 expressed protein                             30   2.3  
At1g05870.2 68414.m00615 expressed protein                             30   2.3  
At1g05870.1 68414.m00614 expressed protein                             30   2.3  
At5g48540.1 68418.m06001 33 kDa secretory protein-related contai...    29   4.0  
At2g35780.1 68415.m04390 serine carboxypeptidase S10 family prot...    28   6.9  

>At2g31560.2 68415.m03856 expressed protein
          Length = 202

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 113 ISSDHLTELVGCLDNGFKIFHFDNPDLC 196
           ++ D L EL GCLD GF   + + P+LC
Sbjct: 98  LTDDDLEELKGCLDLGFGFSYDEIPELC 125


>At2g31560.1 68415.m03855 expressed protein
          Length = 202

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 113 ISSDHLTELVGCLDNGFKIFHFDNPDLC 196
           ++ D L EL GCLD GF   + + P+LC
Sbjct: 98  LTDDDLEELKGCLDLGFGFSYDEIPELC 125


>At2g43340.1 68415.m05389 expressed protein
          Length = 189

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 113 ISSDHLTELVGCLDNGFKIFHFDNPDLC 196
           ++ D L EL GC+D GF   + + P+LC
Sbjct: 85  LTDDDLEELKGCVDLGFGFNYEEIPELC 112


>At1g05870.2 68414.m00615 expressed protein
          Length = 189

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 113 ISSDHLTELVGCLDNGFKIFHFDNPDLC 196
           ++ D L +L GCLD GF   + + P+LC
Sbjct: 84  LTDDDLEDLRGCLDLGFGFSYDEIPELC 111


>At1g05870.1 68414.m00614 expressed protein
          Length = 189

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 113 ISSDHLTELVGCLDNGFKIFHFDNPDLC 196
           ++ D L +L GCLD GF   + + P+LC
Sbjct: 84  LTDDDLEDLRGCLDLGFGFSYDEIPELC 111


>At5g48540.1 68418.m06001 33 kDa secretory protein-related contains
           Pfam PF01657: Domain of unknown function, duplicated in
           33 KDa secretory proteins
          Length = 263

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +3

Query: 153 TMALKYFILITLICACVNAAKITYKICVPSQHLKA 257
           T+ +K F+L+ L+C+C  AA   +++C  + ++ A
Sbjct: 3   TLVVKCFLLLALVCSC-RAADSIWQLCNTNSNISA 36


>At2g35780.1 68415.m04390 serine carboxypeptidase S10 family protein
           similar to Serine carboxypeptidase II chains A and B
           (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
          Length = 452

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 294 PWIWSEYPPCPDTLSGV 244
           PW+W  Y PC +  SG+
Sbjct: 297 PWMWRAYDPCTEKYSGM 313


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,752,204
Number of Sequences: 28952
Number of extensions: 381078
Number of successful extensions: 894
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)