Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_G21
(865 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0281 - 13872289-13872891 32 0.68
02_04_0470 - 23183925-23184743,23184929-23185153 31 1.2
08_02_0787 - 21200762-21201142 31 1.6
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 30 2.1
06_03_0791 - 24641350-24641418,24641684-24641965,24642318-246425... 30 2.7
07_03_1089 - 23879483-23881909 29 3.6
04_04_0680 - 27217563-27220088 29 3.6
03_05_0849 + 28204180-28204539 29 3.6
12_02_1157 + 26565040-26565081,26565189-26565262,26565343-265654... 29 4.8
04_01_0377 - 4970034-4970687 29 4.8
12_02_0223 + 15868889-15869182 29 6.3
08_02_1202 - 25253175-25253340,25255573-25255681,25256021-252561... 29 6.3
08_02_0780 + 21148283-21148634,21148730-21149146,21150194-21150534 29 6.3
07_03_1677 + 28596243-28596320,28596803-28596931,28597040-285972... 29 6.3
11_06_0134 + 20454405-20455121 28 8.4
10_08_0382 - 17408873-17409440,17410711-17410840,17410936-17411068 28 8.4
03_04_0112 - 17375871-17376099,17377021-17377054,17377237-173774... 28 8.4
>04_03_0281 - 13872289-13872891
Length = 200
Score = 31.9 bits (69), Expect = 0.68
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 410 MAT*GTSTTLTFASRTAAKDASTHCARRPKSARASLTTSRTPAASASLH---ARLDVKMA 580
MAT T+TT T S + A + RAS +T R PA S SL A ++A
Sbjct: 1 MATTPTTTTTTTPSAARLLAPAAAAAAAAAATRASFSTLRPPAISLSLSRSAAGCRGRLA 60
Query: 581 TAPVESASAGDG 616
A +S AG G
Sbjct: 61 RAASKSKGAGAG 72
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 455 TAAKDASTHCARRPKSARASLTTSRTPAASASLHA-RLDVKMATAP 589
T+ K +T RR A S S TPA S+S+HA LD + AT P
Sbjct: 34 TSTKAFNTRPLRRRHIASQSSLRSSTPARSSSIHAIGLDEERATRP 79
>08_02_0787 - 21200762-21201142
Length = 126
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 605 AGDGFKLDYGRKYCVPACSNNCAG-VGNCTSPNRCDCAPGLSDNTRWIVQSTMSRLRARC 781
A +LD G VP+C+N C G V T+ ++ CA D+ V T R R
Sbjct: 2 AAKQLELDAGGGGGVPSCANCCGGVVATTTARSKNLCARCYRDHLN-AVDGTAEAARTRA 60
Query: 782 LCCSEMC 802
L S C
Sbjct: 61 LLASLAC 67
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -2
Query: 366 SFRYLPLILDKLSCRYFDITYSDIAHGVNRMVLR*KTMAGVVPVKFGDVFIGVILEAATS 187
+F +LP +L KL+ FD+++ + N R +T+ ++ K + G L S
Sbjct: 3674 AFPWLPALLYKLNIPVFDLSFPECGTICNLFPSRDRTLGQIIASKLVAIKNGGHLPLPLS 3733
Query: 186 VATFD-PRLRVLTAGGYQQEPEHIYNQ 109
+++ D +L L ++ H+Y +
Sbjct: 3734 LSSEDCDKLFALFVSEFRLSSNHLYQR 3760
>06_03_0791 -
24641350-24641418,24641684-24641965,24642318-24642537,
24642657-24642776,24643056-24643132,24643220-24643339,
24644121-24644186,24644265-24644479,24645450-24645582,
24646562-24646708,24647301-24647596,24648222-24648319,
24648425-24648471,24649340-24649449,24649663-24649735,
24650795-24650899
Length = 725
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 208 NTNENIAKFYGNNTSHGFLSQNHTVNTM 291
N+N NI++F GN T H ++ H V+ M
Sbjct: 319 NSNSNISQFGGNGTDHSSGNRYHVVDEM 346
>07_03_1089 - 23879483-23881909
Length = 808
Score = 29.5 bits (63), Expect = 3.6
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 356 YLKETDPGPISASFVLAAMAT*G---TSTTLTFASRTAAKDASTHCARRPKSARASLTTS 526
+ + DPGP++A+ ++AA A G + A A +D H A ARASL
Sbjct: 86 FRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLA-- 143
Query: 527 RTPAASASLHARL 565
PA S HA L
Sbjct: 144 -APAVSV-FHALL 154
>04_04_0680 - 27217563-27220088
Length = 841
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 623 LDYGRKYCVPACSNNCAGVGNCTSPNRCDCA 715
L Y R Y PA C VG C+ RC CA
Sbjct: 595 LQYPRNY-QPAPPAGCGCVGGCSDSKRCACA 624
>03_05_0849 + 28204180-28204539
Length = 119
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 371 DPGPISASFVLAAMAT*GTSTTLTFASRTAAKDASTHCAR 490
DP P S++ ++ M T TT+T ASR A + R
Sbjct: 60 DPPPPSSAMMMTIMTTRARMTTMTMASRARADPSGAELGR 99
>12_02_1157 +
26565040-26565081,26565189-26565262,26565343-26565460,
26565547-26565617,26565704-26565869,26565946-26566145,
26566669-26566880,26567404-26567522,26567952-26568053,
26568144-26568253,26568340-26568427,26568574-26568606,
26568635-26568834,26568916-26569120
Length = 579
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = +1
Query: 205 DNTNENIAKFYGNNTSHG----FLSQNHTVNTMS--DIGVCYIEVP 324
DNT +++ F GN + HG L+ +N++S DI V Y VP
Sbjct: 379 DNTTQSLLSFVGNKSVHGLYDFLLNYKSFLNSLSATDIPVLYSPVP 424
>04_01_0377 - 4970034-4970687
Length = 217
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 10/54 (18%)
Frame = +1
Query: 454 HCSKGCVNALCTAPEIC-------TCFPDHVKNAGGFC---IATCPIGCQNGHC 585
+C GC + C + + C TC + + G+C C GCQNG C
Sbjct: 48 YCGTGCQSGACCSSQRCGSQGGGATCSNNQCCSQYGYCGFGSEYCGSGCQNGPC 101
>12_02_0223 + 15868889-15869182
Length = 97
Score = 28.7 bits (61), Expect = 6.3
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 747 CSPQCXDCAPDAC 785
C+PQC C+P+AC
Sbjct: 61 CAPQCDGCSPEAC 73
>08_02_1202 -
25253175-25253340,25255573-25255681,25256021-25256123,
25256246-25256277,25257697-25258178,25258946-25259025,
25259107-25259165,25259341-25259413,25259526-25259660
Length = 412
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 403 CCNGYVRNIYNPNICEPHCSKGC 471
C NGY I P C P+ S C
Sbjct: 147 CMNGYATGIMAPGRCSPYASASC 169
>08_02_0780 + 21148283-21148634,21148730-21149146,21150194-21150534
Length = 369
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Frame = +3
Query: 651 QLAVTTAPVSVIALHQTDATAHLXYQTTHDGSC------SPQCXDCAPDACVAPKCVLRX 812
+L TTA V+A H A AH Y T C SP D P C+ P
Sbjct: 203 KLDATTASDVVVAHHHPYAAAHDPYAFTFRHYCFPFPAASPAAADEPPFTCLFPGTAATA 262
Query: 813 YQNSGAGTKXP 845
+ G G P
Sbjct: 263 GRGGGGGMTWP 273
>07_03_1677 +
28596243-28596320,28596803-28596931,28597040-28597210,
28597491-28597583
Length = 156
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = -2
Query: 312 ITYSDIAHGVNRMVLR*KTMAGVVPVKFGDVFIGVILEAATSVATFDPRLRVLTAGGYQQ 133
+T + HG V K+ G++ V + F + L + A+ D R+ GG Q
Sbjct: 70 VTVETLGHGFLINVFSDKSCPGLL-VSILEAFDELGLNVLEATASCDDTFRLEAVGGENQ 128
Query: 132 EPEHIYNQHCSRAV 91
EH+ Q +A+
Sbjct: 129 VDEHVIKQTVLQAI 142
>11_06_0134 + 20454405-20455121
Length = 238
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 517 DHVKNAGGFCIATCPIGCQNGHCSG 591
D + AGG +A P+ C+ GH SG
Sbjct: 64 DAAEVAGGSTVAATPLFCRRGHVSG 88
>10_08_0382 - 17408873-17409440,17410711-17410840,17410936-17411068
Length = 276
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 479 HCARRPKSARASLTTSRTPAASASLHARLDVKMATAPVESASAGDG 616
H ++PK+A+++ R S S+ V +T S S+ DG
Sbjct: 134 HTRKQPKAAKSAAAVKREATPSVSVDTSSGVTCSTVTESSPSSADG 179
>03_04_0112 -
17375871-17376099,17377021-17377054,17377237-17377470,
17377636-17377705
Length = 188
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/57 (40%), Positives = 26/57 (45%)
Frame = +1
Query: 292 SDIGVCYIEVPTAQLVEDQRQIPKGNGSRPDLSVIRSCCNGYVRNIYNPNICEPHCS 462
SD VC E PTA L Q+ I G D + I S +G YNPN HCS
Sbjct: 23 SDFCVCRSEQPTALL---QKAIDYSCGQGADCTSILS--SG---GCYNPNTVAAHCS 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,911,028
Number of Sequences: 37544
Number of extensions: 571771
Number of successful extensions: 1905
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1905
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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