Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G20
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   7.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 264  EGTKTKGHAACVTHAVPQDDGCRRC 190
            E  KTKG    V   +  DD   RC
Sbjct: 952  EYIKTKGFGGAVAWTIDLDDFSNRC 976


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 687 RTYEANSVFLADINNVRTVNKTYI 758
           R+Y   SVFL DI  + T+  T I
Sbjct: 68  RSYSNFSVFLFDIITIVTLTSTSI 91


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 494 KLPQIKNMVSLGGQHQGHLWH 556
           +LPQ+ NM   G      ++H
Sbjct: 262 ELPQLPNMTKFGAYSSDKIYH 282


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 259  SFKIFLEKNIPGVYVLSLQI 318
            +F  F +KN  GVY+  LQ+
Sbjct: 1261 NFTYFEDKNEIGVYITYLQL 1280


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 259  SFKIFLEKNIPGVYVLSLQI 318
            +F  F +KN  GVY+  LQ+
Sbjct: 1261 NFTYFEDKNEIGVYITYLQL 1280


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -2

Query: 627 YMQRN*VASSHHHMF-RVSRHHNE 559
           Y +++    SHHH    V+ HH+E
Sbjct: 4   YFEQSGFYGSHHHQSGSVAGHHHE 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,525
Number of Sequences: 336
Number of extensions: 4334
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)